Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cchcr1Q8K2I2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cchcr1Q8K2I2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Cchcr1Q8K2I2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cchcr1Q8K2I2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cchcr1Q8K2I2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cchcr1Q8K2I2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cchcr1Q8K2I2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cchcr1Q8K2I2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cchcr1Q8K2I2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cchcr1Q8K2I2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cchcr1Q8K2I2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cchcr1Q8K2I2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Cchcr1Q8K2I2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC23.08■■□□□ 1.29
Cchcr1Q8K2I2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC23.08■■□□□ 1.29
Cchcr1Q8K2I2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC23.08■■□□□ 1.29
Cchcr1Q8K2I2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC23.08■■□□□ 1.29
Cchcr1Q8K2I2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC23.08■■□□□ 1.29
Cchcr1Q8K2I2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cchcr1Q8K2I2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Cchcr1Q8K2I2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cchcr1Q8K2I2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cchcr1Q8K2I2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Cchcr1Q8K2I2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
Cchcr1Q8K2I2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC23.07■■□□□ 1.28
Cchcr1Q8K2I2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cchcr1Q8K2I2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cchcr1Q8K2I2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
Cchcr1Q8K2I2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC23.06■■□□□ 1.28
Cchcr1Q8K2I2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Cchcr1Q8K2I2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cchcr1Q8K2I2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cchcr1Q8K2I2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cchcr1Q8K2I2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cchcr1Q8K2I2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cchcr1Q8K2I2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Cchcr1Q8K2I2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cchcr1Q8K2I2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cchcr1Q8K2I2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cchcr1Q8K2I2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Cchcr1Q8K2I2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cchcr1Q8K2I2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cchcr1Q8K2I2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cchcr1Q8K2I2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Cchcr1Q8K2I2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC23.05■■□□□ 1.28
Cchcr1Q8K2I2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cchcr1Q8K2I2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cchcr1Q8K2I2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cchcr1Q8K2I2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cchcr1Q8K2I2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC23.04■■□□□ 1.28
Cchcr1Q8K2I2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC23.04■■□□□ 1.28
Cchcr1Q8K2I2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cchcr1Q8K2I2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cchcr1Q8K2I2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cchcr1Q8K2I2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cchcr1Q8K2I2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cchcr1Q8K2I2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Cchcr1Q8K2I2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cchcr1Q8K2I2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cchcr1Q8K2I2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Cchcr1Q8K2I2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cchcr1Q8K2I2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cchcr1Q8K2I2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Cchcr1Q8K2I2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cchcr1Q8K2I2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cchcr1Q8K2I2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Cchcr1Q8K2I2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cchcr1Q8K2I2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC23.02■■□□□ 1.28
Cchcr1Q8K2I2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cchcr1Q8K2I2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Cchcr1Q8K2I2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cchcr1Q8K2I2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cchcr1Q8K2I2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cchcr1Q8K2I2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC23.02■■□□□ 1.27
Cchcr1Q8K2I2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cchcr1Q8K2I2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cchcr1Q8K2I2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC23.01■■□□□ 1.27
Cchcr1Q8K2I2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cchcr1Q8K2I2 Gm20100-201ENSMUST00000209418 2272 ntBASIC23.01■■□□□ 1.27
Cchcr1Q8K2I2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cchcr1Q8K2I2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Cchcr1Q8K2I2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Cchcr1Q8K2I2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Cchcr1Q8K2I2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC23■■□□□ 1.27
Cchcr1Q8K2I2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC23■■□□□ 1.27
Cchcr1Q8K2I2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
Cchcr1Q8K2I2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Cchcr1Q8K2I2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cchcr1Q8K2I2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cchcr1Q8K2I2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cchcr1Q8K2I2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cchcr1Q8K2I2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Cchcr1Q8K2I2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cchcr1Q8K2I2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Cchcr1Q8K2I2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
Cchcr1Q8K2I2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.98■■□□□ 1.27
Cchcr1Q8K2I2 AC154266.1-201ENSMUST00000223190 503 ntBASIC22.98■■□□□ 1.27
Cchcr1Q8K2I2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Cchcr1Q8K2I2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cchcr1Q8K2I2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms