Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cnot3Q8K0V4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cnot3Q8K0V4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cnot3Q8K0V4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cnot3Q8K0V4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cnot3Q8K0V4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cnot3Q8K0V4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cnot3Q8K0V4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cnot3Q8K0V4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cnot3Q8K0V4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cnot3Q8K0V4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cnot3Q8K0V4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.33■□□□□ 0.52
Cnot3Q8K0V4 Gm45444-201ENSMUST00000211394 898 ntBASIC18.33■□□□□ 0.52
Cnot3Q8K0V4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.33■□□□□ 0.52
Cnot3Q8K0V4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Cnot3Q8K0V4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.33■□□□□ 0.52
Cnot3Q8K0V4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Cnot3Q8K0V4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cnot3Q8K0V4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cnot3Q8K0V4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cnot3Q8K0V4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cnot3Q8K0V4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cnot3Q8K0V4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.32■□□□□ 0.52
Cnot3Q8K0V4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cnot3Q8K0V4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Cnot3Q8K0V4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.32■□□□□ 0.52
Cnot3Q8K0V4 Gm7143-201ENSMUST00000222811 859 ntBASIC18.32■□□□□ 0.52
Cnot3Q8K0V4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cnot3Q8K0V4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Cnot3Q8K0V4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.32■□□□□ 0.52
Cnot3Q8K0V4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cnot3Q8K0V4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cnot3Q8K0V4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cnot3Q8K0V4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cnot3Q8K0V4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cnot3Q8K0V4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cnot3Q8K0V4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cnot3Q8K0V4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cnot3Q8K0V4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cnot3Q8K0V4 Mir6538-201ENSMUST00000183713 110 ntBASIC18.31■□□□□ 0.52
Cnot3Q8K0V4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cnot3Q8K0V4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cnot3Q8K0V4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cnot3Q8K0V4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cnot3Q8K0V4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cnot3Q8K0V4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cnot3Q8K0V4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cnot3Q8K0V4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cnot3Q8K0V4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cnot3Q8K0V4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cnot3Q8K0V4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.3■□□□□ 0.52
Cnot3Q8K0V4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cnot3Q8K0V4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cnot3Q8K0V4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cnot3Q8K0V4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cnot3Q8K0V4 Mir6236-201ENSMUST00000184437 123 ntBASIC18.29■□□□□ 0.52
Cnot3Q8K0V4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.29■□□□□ 0.52
Cnot3Q8K0V4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
Cnot3Q8K0V4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cnot3Q8K0V4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.29■□□□□ 0.52
Cnot3Q8K0V4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cnot3Q8K0V4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cnot3Q8K0V4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Cnot3Q8K0V4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cnot3Q8K0V4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cnot3Q8K0V4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cnot3Q8K0V4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cnot3Q8K0V4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cnot3Q8K0V4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cnot3Q8K0V4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cnot3Q8K0V4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cnot3Q8K0V4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cnot3Q8K0V4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.28■□□□□ 0.52
Cnot3Q8K0V4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.28■□□□□ 0.52
Cnot3Q8K0V4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cnot3Q8K0V4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cnot3Q8K0V4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Cnot3Q8K0V4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cnot3Q8K0V4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cnot3Q8K0V4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cnot3Q8K0V4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cnot3Q8K0V4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cnot3Q8K0V4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.27■□□□□ 0.52
Cnot3Q8K0V4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cnot3Q8K0V4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cnot3Q8K0V4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cnot3Q8K0V4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cnot3Q8K0V4 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cnot3Q8K0V4 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cnot3Q8K0V4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
Cnot3Q8K0V4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cnot3Q8K0V4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cnot3Q8K0V4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cnot3Q8K0V4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cnot3Q8K0V4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cnot3Q8K0V4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.26■□□□□ 0.51
Cnot3Q8K0V4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cnot3Q8K0V4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cnot3Q8K0V4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cnot3Q8K0V4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms