Protein–RNA interactions for Protein: Q8K0S9

Snapc1, snRNA-activating protein complex subunit 1, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snapc1Q8K0S9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snapc1Q8K0S9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Snapc1Q8K0S9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snapc1Q8K0S9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snapc1Q8K0S9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Snapc1Q8K0S9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.77■□□□□ 0.6
Snapc1Q8K0S9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snapc1Q8K0S9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snapc1Q8K0S9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snapc1Q8K0S9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snapc1Q8K0S9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Snapc1Q8K0S9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Snapc1Q8K0S9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snapc1Q8K0S9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snapc1Q8K0S9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Snapc1Q8K0S9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snapc1Q8K0S9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.76■□□□□ 0.59
Snapc1Q8K0S9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snapc1Q8K0S9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.76■□□□□ 0.59
Snapc1Q8K0S9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snapc1Q8K0S9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.75■□□□□ 0.59
Snapc1Q8K0S9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Snapc1Q8K0S9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Snapc1Q8K0S9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Snapc1Q8K0S9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Snapc1Q8K0S9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.75■□□□□ 0.59
Snapc1Q8K0S9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.75■□□□□ 0.59
Snapc1Q8K0S9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Snapc1Q8K0S9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Snapc1Q8K0S9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Snapc1Q8K0S9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Snapc1Q8K0S9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Snapc1Q8K0S9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Snapc1Q8K0S9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Snapc1Q8K0S9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Snapc1Q8K0S9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Snapc1Q8K0S9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Snapc1Q8K0S9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Snapc1Q8K0S9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Snapc1Q8K0S9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Snapc1Q8K0S9 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.74■□□□□ 0.59
Snapc1Q8K0S9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Snapc1Q8K0S9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Snapc1Q8K0S9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Snapc1Q8K0S9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Snapc1Q8K0S9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Snapc1Q8K0S9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Snapc1Q8K0S9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Snapc1Q8K0S9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Snapc1Q8K0S9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Snapc1Q8K0S9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Snapc1Q8K0S9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Snapc1Q8K0S9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Snapc1Q8K0S9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Snapc1Q8K0S9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Snapc1Q8K0S9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Snapc1Q8K0S9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Snapc1Q8K0S9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Snapc1Q8K0S9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Snapc1Q8K0S9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.73■□□□□ 0.59
Snapc1Q8K0S9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Snapc1Q8K0S9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Snapc1Q8K0S9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Snapc1Q8K0S9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.73■□□□□ 0.59
Snapc1Q8K0S9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Snapc1Q8K0S9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Snapc1Q8K0S9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Snapc1Q8K0S9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Snapc1Q8K0S9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Snapc1Q8K0S9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Snapc1Q8K0S9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.72■□□□□ 0.59
Snapc1Q8K0S9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Snapc1Q8K0S9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.72■□□□□ 0.59
Snapc1Q8K0S9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.72■□□□□ 0.59
Snapc1Q8K0S9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Snapc1Q8K0S9 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.72■□□□□ 0.59
Snapc1Q8K0S9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Snapc1Q8K0S9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.72■□□□□ 0.59
Snapc1Q8K0S9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Snapc1Q8K0S9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Snapc1Q8K0S9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snapc1Q8K0S9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Snapc1Q8K0S9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snapc1Q8K0S9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snapc1Q8K0S9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snapc1Q8K0S9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snapc1Q8K0S9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snapc1Q8K0S9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.71■□□□□ 0.59
Snapc1Q8K0S9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Snapc1Q8K0S9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Snapc1Q8K0S9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snapc1Q8K0S9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snapc1Q8K0S9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Snapc1Q8K0S9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snapc1Q8K0S9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snapc1Q8K0S9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Snapc1Q8K0S9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Snapc1Q8K0S9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snapc1Q8K0S9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snapc1Q8K0S9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms