Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.63■□□□□ 0.57
Hmgcs1Q8JZK9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgcs1Q8JZK9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgcs1Q8JZK9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Hmgcs1Q8JZK9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgcs1Q8JZK9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmgcs1Q8JZK9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hmgcs1Q8JZK9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.62■□□□□ 0.57
Hmgcs1Q8JZK9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.62■□□□□ 0.57
Hmgcs1Q8JZK9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
Hmgcs1Q8JZK9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.62■□□□□ 0.57
Hmgcs1Q8JZK9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hmgcs1Q8JZK9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmgcs1Q8JZK9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmgcs1Q8JZK9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hmgcs1Q8JZK9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmgcs1Q8JZK9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmgcs1Q8JZK9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hmgcs1Q8JZK9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmgcs1Q8JZK9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmgcs1Q8JZK9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmgcs1Q8JZK9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmgcs1Q8JZK9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Hmgcs1Q8JZK9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Hmgcs1Q8JZK9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Hmgcs1Q8JZK9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmgcs1Q8JZK9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmgcs1Q8JZK9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgcs1Q8JZK9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgcs1Q8JZK9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Hmgcs1Q8JZK9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgcs1Q8JZK9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgcs1Q8JZK9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.6■□□□□ 0.57
Hmgcs1Q8JZK9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgcs1Q8JZK9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgcs1Q8JZK9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Hmgcs1Q8JZK9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgcs1Q8JZK9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgcs1Q8JZK9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgcs1Q8JZK9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Hmgcs1Q8JZK9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Hmgcs1Q8JZK9 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.59■□□□□ 0.57
Hmgcs1Q8JZK9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgcs1Q8JZK9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Hmgcs1Q8JZK9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgcs1Q8JZK9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Hmgcs1Q8JZK9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgcs1Q8JZK9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgcs1Q8JZK9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Hmgcs1Q8JZK9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgcs1Q8JZK9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgcs1Q8JZK9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgcs1Q8JZK9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Hmgcs1Q8JZK9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hmgcs1Q8JZK9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hmgcs1Q8JZK9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.58■□□□□ 0.57
Hmgcs1Q8JZK9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Hmgcs1Q8JZK9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hmgcs1Q8JZK9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Hmgcs1Q8JZK9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hmgcs1Q8JZK9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hmgcs1Q8JZK9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hmgcs1Q8JZK9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hmgcs1Q8JZK9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hmgcs1Q8JZK9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Hmgcs1Q8JZK9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgcs1Q8JZK9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgcs1Q8JZK9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgcs1Q8JZK9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Hmgcs1Q8JZK9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgcs1Q8JZK9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgcs1Q8JZK9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgcs1Q8JZK9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.57■□□□□ 0.56
Hmgcs1Q8JZK9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgcs1Q8JZK9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.57■□□□□ 0.56
Hmgcs1Q8JZK9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Hmgcs1Q8JZK9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmgcs1Q8JZK9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmgcs1Q8JZK9 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.56■□□□□ 0.56
Hmgcs1Q8JZK9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmgcs1Q8JZK9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmgcs1Q8JZK9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmgcs1Q8JZK9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hmgcs1Q8JZK9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmgcs1Q8JZK9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.55■□□□□ 0.56
Hmgcs1Q8JZK9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmgcs1Q8JZK9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmgcs1Q8JZK9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hmgcs1Q8JZK9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.55■□□□□ 0.56
Hmgcs1Q8JZK9 AA386476-201ENSMUST00000098781 1665 ntBASIC18.55■□□□□ 0.56
Hmgcs1Q8JZK9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.55■□□□□ 0.56
Hmgcs1Q8JZK9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.55■□□□□ 0.56
Hmgcs1Q8JZK9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmgcs1Q8JZK9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgcs1Q8JZK9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgcs1Q8JZK9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgcs1Q8JZK9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgcs1Q8JZK9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgcs1Q8JZK9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgcs1Q8JZK9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms