Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.73■□□□□ 0.75
Trpm6Q8CIR4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trpm6Q8CIR4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trpm6Q8CIR4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trpm6Q8CIR4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trpm6Q8CIR4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trpm6Q8CIR4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.73■□□□□ 0.75
Trpm6Q8CIR4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.73■□□□□ 0.75
Trpm6Q8CIR4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trpm6Q8CIR4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trpm6Q8CIR4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
Trpm6Q8CIR4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trpm6Q8CIR4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.72■□□□□ 0.75
Trpm6Q8CIR4 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trpm6Q8CIR4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trpm6Q8CIR4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trpm6Q8CIR4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Trpm6Q8CIR4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trpm6Q8CIR4 Gm12441-201ENSMUST00000121806 588 ntBASIC19.71■□□□□ 0.75
Trpm6Q8CIR4 Mir5133-201ENSMUST00000174955 77 ntBASIC19.71■□□□□ 0.75
Trpm6Q8CIR4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.71■□□□□ 0.75
Trpm6Q8CIR4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trpm6Q8CIR4 AA386476-201ENSMUST00000098781 1665 ntBASIC19.71■□□□□ 0.75
Trpm6Q8CIR4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trpm6Q8CIR4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trpm6Q8CIR4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Trpm6Q8CIR4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trpm6Q8CIR4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trpm6Q8CIR4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trpm6Q8CIR4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trpm6Q8CIR4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trpm6Q8CIR4 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.71■□□□□ 0.75
Trpm6Q8CIR4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trpm6Q8CIR4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trpm6Q8CIR4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Trpm6Q8CIR4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Trpm6Q8CIR4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.7■□□□□ 0.74
Trpm6Q8CIR4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.7■□□□□ 0.74
Trpm6Q8CIR4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trpm6Q8CIR4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trpm6Q8CIR4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trpm6Q8CIR4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trpm6Q8CIR4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trpm6Q8CIR4 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.69■□□□□ 0.74
Trpm6Q8CIR4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.69■□□□□ 0.74
Trpm6Q8CIR4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trpm6Q8CIR4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trpm6Q8CIR4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.69■□□□□ 0.74
Trpm6Q8CIR4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpm6Q8CIR4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpm6Q8CIR4 Gm38205-201ENSMUST00000192243 258 ntBASIC19.68■□□□□ 0.74
Trpm6Q8CIR4 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.68■□□□□ 0.74
Trpm6Q8CIR4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpm6Q8CIR4 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.68■□□□□ 0.74
Trpm6Q8CIR4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.68■□□□□ 0.74
Trpm6Q8CIR4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trpm6Q8CIR4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trpm6Q8CIR4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Trpm6Q8CIR4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Trpm6Q8CIR4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.67■□□□□ 0.74
Trpm6Q8CIR4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trpm6Q8CIR4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trpm6Q8CIR4 Gm4968-201ENSMUST00000071458 858 ntBASIC19.67■□□□□ 0.74
Trpm6Q8CIR4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trpm6Q8CIR4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.67■□□□□ 0.74
Trpm6Q8CIR4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Trpm6Q8CIR4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trpm6Q8CIR4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Trpm6Q8CIR4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trpm6Q8CIR4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.66■□□□□ 0.74
Trpm6Q8CIR4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.66■□□□□ 0.74
Trpm6Q8CIR4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Trpm6Q8CIR4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trpm6Q8CIR4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trpm6Q8CIR4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trpm6Q8CIR4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Trpm6Q8CIR4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trpm6Q8CIR4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trpm6Q8CIR4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.66■□□□□ 0.74
Trpm6Q8CIR4 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.66■□□□□ 0.74
Trpm6Q8CIR4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.65■□□□□ 0.74
Trpm6Q8CIR4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trpm6Q8CIR4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trpm6Q8CIR4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trpm6Q8CIR4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trpm6Q8CIR4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trpm6Q8CIR4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trpm6Q8CIR4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trpm6Q8CIR4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.65■□□□□ 0.74
Trpm6Q8CIR4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trpm6Q8CIR4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trpm6Q8CIR4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Trpm6Q8CIR4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.64■□□□□ 0.74
Trpm6Q8CIR4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trpm6Q8CIR4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trpm6Q8CIR4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trpm6Q8CIR4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trpm6Q8CIR4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.64■□□□□ 0.73
Trpm6Q8CIR4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trpm6Q8CIR4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms