Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CopaQ8CIE6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.89■□□□□ 0.77
CopaQ8CIE6 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.89■□□□□ 0.77
CopaQ8CIE6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.89■□□□□ 0.77
CopaQ8CIE6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CopaQ8CIE6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CopaQ8CIE6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CopaQ8CIE6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CopaQ8CIE6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CopaQ8CIE6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CopaQ8CIE6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CopaQ8CIE6 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CopaQ8CIE6 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.88■□□□□ 0.77
CopaQ8CIE6 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CopaQ8CIE6 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CopaQ8CIE6 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CopaQ8CIE6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CopaQ8CIE6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CopaQ8CIE6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CopaQ8CIE6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
CopaQ8CIE6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CopaQ8CIE6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CopaQ8CIE6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CopaQ8CIE6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.87■□□□□ 0.77
CopaQ8CIE6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CopaQ8CIE6 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CopaQ8CIE6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CopaQ8CIE6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.87■□□□□ 0.77
CopaQ8CIE6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CopaQ8CIE6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CopaQ8CIE6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CopaQ8CIE6 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.87■□□□□ 0.77
CopaQ8CIE6 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
CopaQ8CIE6 Spcs1-204ENSMUST00000226782 949 ntBASIC19.87■□□□□ 0.77
CopaQ8CIE6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CopaQ8CIE6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CopaQ8CIE6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CopaQ8CIE6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CopaQ8CIE6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CopaQ8CIE6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CopaQ8CIE6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CopaQ8CIE6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CopaQ8CIE6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CopaQ8CIE6 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CopaQ8CIE6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.86■□□□□ 0.77
CopaQ8CIE6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CopaQ8CIE6 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.86■□□□□ 0.77
CopaQ8CIE6 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CopaQ8CIE6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CopaQ8CIE6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CopaQ8CIE6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CopaQ8CIE6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
CopaQ8CIE6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CopaQ8CIE6 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CopaQ8CIE6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CopaQ8CIE6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CopaQ8CIE6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CopaQ8CIE6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CopaQ8CIE6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CopaQ8CIE6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CopaQ8CIE6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.85■□□□□ 0.77
CopaQ8CIE6 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CopaQ8CIE6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CopaQ8CIE6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CopaQ8CIE6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CopaQ8CIE6 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.85■□□□□ 0.77
CopaQ8CIE6 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.84■□□□□ 0.77
CopaQ8CIE6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CopaQ8CIE6 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.84■□□□□ 0.77
CopaQ8CIE6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CopaQ8CIE6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.84■□□□□ 0.77
CopaQ8CIE6 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CopaQ8CIE6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CopaQ8CIE6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CopaQ8CIE6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CopaQ8CIE6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CopaQ8CIE6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CopaQ8CIE6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CopaQ8CIE6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CopaQ8CIE6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.83■□□□□ 0.77
CopaQ8CIE6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CopaQ8CIE6 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CopaQ8CIE6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CopaQ8CIE6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.83■□□□□ 0.76
CopaQ8CIE6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CopaQ8CIE6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CopaQ8CIE6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CopaQ8CIE6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CopaQ8CIE6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CopaQ8CIE6 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CopaQ8CIE6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CopaQ8CIE6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CopaQ8CIE6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CopaQ8CIE6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CopaQ8CIE6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CopaQ8CIE6 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.81■□□□□ 0.76
CopaQ8CIE6 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.81■□□□□ 0.76
CopaQ8CIE6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CopaQ8CIE6 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CopaQ8CIE6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms