Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rftn2Q8CHX7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rftn2Q8CHX7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rftn2Q8CHX7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Rftn2Q8CHX7 Gm13234-201ENSMUST00000120010 747 ntBASIC20.87■□□□□ 0.93
Rftn2Q8CHX7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.87■□□□□ 0.93
Rftn2Q8CHX7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rftn2Q8CHX7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rftn2Q8CHX7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.87■□□□□ 0.93
Rftn2Q8CHX7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.86■□□□□ 0.93
Rftn2Q8CHX7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rftn2Q8CHX7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rftn2Q8CHX7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.86■□□□□ 0.93
Rftn2Q8CHX7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.86■□□□□ 0.93
Rftn2Q8CHX7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rftn2Q8CHX7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rftn2Q8CHX7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rftn2Q8CHX7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Rftn2Q8CHX7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rftn2Q8CHX7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rftn2Q8CHX7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rftn2Q8CHX7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.85■□□□□ 0.93
Rftn2Q8CHX7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rftn2Q8CHX7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rftn2Q8CHX7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.85■□□□□ 0.93
Rftn2Q8CHX7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rftn2Q8CHX7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rftn2Q8CHX7 Reep4-203ENSMUST00000226563 1444 ntBASIC20.85■□□□□ 0.93
Rftn2Q8CHX7 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.85■□□□□ 0.93
Rftn2Q8CHX7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rftn2Q8CHX7 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Rftn2Q8CHX7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rftn2Q8CHX7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Rftn2Q8CHX7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rftn2Q8CHX7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
Rftn2Q8CHX7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.84■□□□□ 0.93
Rftn2Q8CHX7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Rftn2Q8CHX7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rftn2Q8CHX7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rftn2Q8CHX7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rftn2Q8CHX7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rftn2Q8CHX7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Rftn2Q8CHX7 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.83■□□□□ 0.93
Rftn2Q8CHX7 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rftn2Q8CHX7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Rftn2Q8CHX7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Rftn2Q8CHX7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Rftn2Q8CHX7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rftn2Q8CHX7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Rftn2Q8CHX7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rftn2Q8CHX7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.82■□□□□ 0.92
Rftn2Q8CHX7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rftn2Q8CHX7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.82■□□□□ 0.92
Rftn2Q8CHX7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Rftn2Q8CHX7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rftn2Q8CHX7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rftn2Q8CHX7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Rftn2Q8CHX7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Rftn2Q8CHX7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.82■□□□□ 0.92
Rftn2Q8CHX7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rftn2Q8CHX7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rftn2Q8CHX7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rftn2Q8CHX7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Rftn2Q8CHX7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rftn2Q8CHX7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rftn2Q8CHX7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rftn2Q8CHX7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.81■□□□□ 0.92
Rftn2Q8CHX7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rftn2Q8CHX7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.81■□□□□ 0.92
Rftn2Q8CHX7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rftn2Q8CHX7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.81■□□□□ 0.92
Rftn2Q8CHX7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rftn2Q8CHX7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Rftn2Q8CHX7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.8■□□□□ 0.92
Rftn2Q8CHX7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rftn2Q8CHX7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Rftn2Q8CHX7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rftn2Q8CHX7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rftn2Q8CHX7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rftn2Q8CHX7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rftn2Q8CHX7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rftn2Q8CHX7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rftn2Q8CHX7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rftn2Q8CHX7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rftn2Q8CHX7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rftn2Q8CHX7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rftn2Q8CHX7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.79■□□□□ 0.92
Rftn2Q8CHX7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.79■□□□□ 0.92
Rftn2Q8CHX7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rftn2Q8CHX7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rftn2Q8CHX7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Rftn2Q8CHX7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rftn2Q8CHX7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rftn2Q8CHX7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.78■□□□□ 0.92
Rftn2Q8CHX7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Rftn2Q8CHX7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.78■□□□□ 0.92
Rftn2Q8CHX7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.78■□□□□ 0.92
Rftn2Q8CHX7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
Rftn2Q8CHX7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rftn2Q8CHX7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms