Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccdc28bQ8CEG5 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc28bQ8CEG5 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.29■□□□□ 0.68
Ccdc28bQ8CEG5 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ccdc28bQ8CEG5 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.29■□□□□ 0.68
Ccdc28bQ8CEG5 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc28bQ8CEG5 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc28bQ8CEG5 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc28bQ8CEG5 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc28bQ8CEG5 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc28bQ8CEG5 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc28bQ8CEG5 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Ccdc28bQ8CEG5 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc28bQ8CEG5 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.28■□□□□ 0.68
Ccdc28bQ8CEG5 Gm7143-201ENSMUST00000222811 859 ntBASIC19.28■□□□□ 0.68
Ccdc28bQ8CEG5 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Ccdc28bQ8CEG5 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc28bQ8CEG5 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc28bQ8CEG5 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc28bQ8CEG5 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc28bQ8CEG5 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.28■□□□□ 0.68
Ccdc28bQ8CEG5 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc28bQ8CEG5 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc28bQ8CEG5 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc28bQ8CEG5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc28bQ8CEG5 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc28bQ8CEG5 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc28bQ8CEG5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc28bQ8CEG5 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc28bQ8CEG5 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Ccdc28bQ8CEG5 Grk6-206ENSMUST00000224995 2971 ntBASIC19.26■□□□□ 0.67
Ccdc28bQ8CEG5 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc28bQ8CEG5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.26■□□□□ 0.67
Ccdc28bQ8CEG5 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc28bQ8CEG5 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.26■□□□□ 0.67
Ccdc28bQ8CEG5 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.26■□□□□ 0.67
Ccdc28bQ8CEG5 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc28bQ8CEG5 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc28bQ8CEG5 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc28bQ8CEG5 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc28bQ8CEG5 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.25■□□□□ 0.67
Ccdc28bQ8CEG5 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc28bQ8CEG5 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc28bQ8CEG5 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ccdc28bQ8CEG5 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc28bQ8CEG5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc28bQ8CEG5 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc28bQ8CEG5 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc28bQ8CEG5 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc28bQ8CEG5 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc28bQ8CEG5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc28bQ8CEG5 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc28bQ8CEG5 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc28bQ8CEG5 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ccdc28bQ8CEG5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccdc28bQ8CEG5 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc28bQ8CEG5 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc28bQ8CEG5 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.24■□□□□ 0.67
Ccdc28bQ8CEG5 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc28bQ8CEG5 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc28bQ8CEG5 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc28bQ8CEG5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc28bQ8CEG5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc28bQ8CEG5 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc28bQ8CEG5 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Ccdc28bQ8CEG5 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc28bQ8CEG5 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc28bQ8CEG5 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc28bQ8CEG5 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.23■□□□□ 0.67
Ccdc28bQ8CEG5 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc28bQ8CEG5 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc28bQ8CEG5 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ccdc28bQ8CEG5 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc28bQ8CEG5 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc28bQ8CEG5 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc28bQ8CEG5 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc28bQ8CEG5 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc28bQ8CEG5 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.23■□□□□ 0.67
Ccdc28bQ8CEG5 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc28bQ8CEG5 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ccdc28bQ8CEG5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc28bQ8CEG5 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc28bQ8CEG5 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc28bQ8CEG5 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.22■□□□□ 0.67
Ccdc28bQ8CEG5 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.22■□□□□ 0.67
Ccdc28bQ8CEG5 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.22■□□□□ 0.67
Ccdc28bQ8CEG5 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc28bQ8CEG5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc28bQ8CEG5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc28bQ8CEG5 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.22■□□□□ 0.67
Ccdc28bQ8CEG5 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc28bQ8CEG5 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Ccdc28bQ8CEG5 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.21■□□□□ 0.67
Ccdc28bQ8CEG5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc28bQ8CEG5 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Ccdc28bQ8CEG5 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc28bQ8CEG5 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.21■□□□□ 0.67
Ccdc28bQ8CEG5 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.21■□□□□ 0.67
Ccdc28bQ8CEG5 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc28bQ8CEG5 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 351.1 ms