Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb7Q8CDY9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb7Q8CDY9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb7Q8CDY9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb7Q8CDY9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb7Q8CDY9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb7Q8CDY9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb7Q8CDY9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb7Q8CDY9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb7Q8CDY9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb7Q8CDY9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb7Q8CDY9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb7Q8CDY9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb7Q8CDY9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb7Q8CDY9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Pcdhb7Q8CDY9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Pcdhb7Q8CDY9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb7Q8CDY9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.54■□□□□ 0.72
Pcdhb7Q8CDY9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb7Q8CDY9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb7Q8CDY9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb7Q8CDY9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb7Q8CDY9 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.54■□□□□ 0.72
Pcdhb7Q8CDY9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb7Q8CDY9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb7Q8CDY9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb7Q8CDY9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Pcdhb7Q8CDY9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb7Q8CDY9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb7Q8CDY9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb7Q8CDY9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.53■□□□□ 0.72
Pcdhb7Q8CDY9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Pcdhb7Q8CDY9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb7Q8CDY9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb7Q8CDY9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb7Q8CDY9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb7Q8CDY9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb7Q8CDY9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Pcdhb7Q8CDY9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Pcdhb7Q8CDY9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb7Q8CDY9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb7Q8CDY9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Pcdhb7Q8CDY9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb7Q8CDY9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb7Q8CDY9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb7Q8CDY9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb7Q8CDY9 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.52■□□□□ 0.72
Pcdhb7Q8CDY9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb7Q8CDY9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb7Q8CDY9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.72
Pcdhb7Q8CDY9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdhb7Q8CDY9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.52■□□□□ 0.71
Pcdhb7Q8CDY9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdhb7Q8CDY9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdhb7Q8CDY9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdhb7Q8CDY9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.51■□□□□ 0.71
Pcdhb7Q8CDY9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb7Q8CDY9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Pcdhb7Q8CDY9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb7Q8CDY9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb7Q8CDY9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb7Q8CDY9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.51■□□□□ 0.71
Pcdhb7Q8CDY9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb7Q8CDY9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Pcdhb7Q8CDY9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb7Q8CDY9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Pcdhb7Q8CDY9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb7Q8CDY9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb7Q8CDY9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb7Q8CDY9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb7Q8CDY9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb7Q8CDY9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.49■□□□□ 0.71
Pcdhb7Q8CDY9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb7Q8CDY9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb7Q8CDY9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb7Q8CDY9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb7Q8CDY9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb7Q8CDY9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb7Q8CDY9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb7Q8CDY9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb7Q8CDY9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Pcdhb7Q8CDY9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb7Q8CDY9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb7Q8CDY9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.48■□□□□ 0.71
Pcdhb7Q8CDY9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb7Q8CDY9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb7Q8CDY9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Pcdhb7Q8CDY9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb7Q8CDY9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.47■□□□□ 0.71
Pcdhb7Q8CDY9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.47■□□□□ 0.71
Pcdhb7Q8CDY9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb7Q8CDY9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb7Q8CDY9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb7Q8CDY9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb7Q8CDY9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.46■□□□□ 0.71
Pcdhb7Q8CDY9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb7Q8CDY9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhb7Q8CDY9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb7Q8CDY9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb7Q8CDY9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms