Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.42■■□□□ 1.02
Prpf31Q8CCF0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Prpf31Q8CCF0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Prpf31Q8CCF0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Prpf31Q8CCF0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Prpf31Q8CCF0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Prpf31Q8CCF0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.41■■□□□ 1.02
Prpf31Q8CCF0 Gm42642-201ENSMUST00000200683 355 ntBASIC21.41■■□□□ 1.02
Prpf31Q8CCF0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
Prpf31Q8CCF0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Prpf31Q8CCF0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Prpf31Q8CCF0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
Prpf31Q8CCF0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.4■■□□□ 1.02
Prpf31Q8CCF0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Prpf31Q8CCF0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Prpf31Q8CCF0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Prpf31Q8CCF0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
Prpf31Q8CCF0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Prpf31Q8CCF0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Prpf31Q8CCF0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Prpf31Q8CCF0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Prpf31Q8CCF0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Prpf31Q8CCF0 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.38■■□□□ 1.01
Prpf31Q8CCF0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Prpf31Q8CCF0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.38■■□□□ 1.01
Prpf31Q8CCF0 Gm27801-201ENSMUST00000184174 223 ntBASIC21.38■■□□□ 1.01
Prpf31Q8CCF0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Prpf31Q8CCF0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Prpf31Q8CCF0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Prpf31Q8CCF0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Prpf31Q8CCF0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Prpf31Q8CCF0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Prpf31Q8CCF0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Prpf31Q8CCF0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.37■■□□□ 1.01
Prpf31Q8CCF0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Prpf31Q8CCF0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Prpf31Q8CCF0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Prpf31Q8CCF0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.37■■□□□ 1.01
Prpf31Q8CCF0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Prpf31Q8CCF0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.37■■□□□ 1.01
Prpf31Q8CCF0 AA386476-201ENSMUST00000098781 1665 ntBASIC21.37■■□□□ 1.01
Prpf31Q8CCF0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.36■■□□□ 1.01
Prpf31Q8CCF0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Prpf31Q8CCF0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.36■■□□□ 1.01
Prpf31Q8CCF0 Gm26571-201ENSMUST00000181399 666 ntBASIC21.36■■□□□ 1.01
Prpf31Q8CCF0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Prpf31Q8CCF0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Prpf31Q8CCF0 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.36■■□□□ 1.01
Prpf31Q8CCF0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
Prpf31Q8CCF0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Prpf31Q8CCF0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Prpf31Q8CCF0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Prpf31Q8CCF0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Prpf31Q8CCF0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Prpf31Q8CCF0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Prpf31Q8CCF0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Prpf31Q8CCF0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Prpf31Q8CCF0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Prpf31Q8CCF0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Prpf31Q8CCF0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.35■■□□□ 1.01
Prpf31Q8CCF0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.35■■□□□ 1.01
Prpf31Q8CCF0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Prpf31Q8CCF0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Prpf31Q8CCF0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Prpf31Q8CCF0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Prpf31Q8CCF0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Prpf31Q8CCF0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Prpf31Q8CCF0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Prpf31Q8CCF0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Prpf31Q8CCF0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Prpf31Q8CCF0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Prpf31Q8CCF0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.34■■□□□ 1.01
Prpf31Q8CCF0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Prpf31Q8CCF0 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.34■■□□□ 1.01
Prpf31Q8CCF0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Prpf31Q8CCF0 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.34■■□□□ 1.01
Prpf31Q8CCF0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Prpf31Q8CCF0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Prpf31Q8CCF0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Prpf31Q8CCF0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Prpf31Q8CCF0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Prpf31Q8CCF0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Prpf31Q8CCF0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Prpf31Q8CCF0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
Prpf31Q8CCF0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Prpf31Q8CCF0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Prpf31Q8CCF0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Prpf31Q8CCF0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.33■■□□□ 1
Prpf31Q8CCF0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Prpf31Q8CCF0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Prpf31Q8CCF0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.32■■□□□ 1
Prpf31Q8CCF0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.32■■□□□ 1
Prpf31Q8CCF0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.32■■□□□ 1
Prpf31Q8CCF0 Gm42778-201ENSMUST00000199644 553 ntBASIC21.32■■□□□ 1
Prpf31Q8CCF0 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.32■■□□□ 1
Prpf31Q8CCF0 Gm9988-201ENSMUST00000069786 435 ntBASIC21.32■■□□□ 1
Prpf31Q8CCF0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Prpf31Q8CCF0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Prpf31Q8CCF0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.31■■□□□ 1
Prpf31Q8CCF0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms