Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Gm44878-201ENSMUST00000205812 1295 ntBASIC22.53■■□□□ 1.2
Rtp1Q8C8C1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rtp1Q8C8C1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rtp1Q8C8C1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Rtp1Q8C8C1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rtp1Q8C8C1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.53■■□□□ 1.2
Rtp1Q8C8C1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rtp1Q8C8C1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rtp1Q8C8C1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC22.52■■□□□ 1.2
Rtp1Q8C8C1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Rtp1Q8C8C1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC22.52■■□□□ 1.2
Rtp1Q8C8C1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
Rtp1Q8C8C1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Rtp1Q8C8C1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rtp1Q8C8C1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.52■■□□□ 1.2
Rtp1Q8C8C1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Rtp1Q8C8C1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Rtp1Q8C8C1 Gm13836-201ENSMUST00000121159 501 ntBASIC22.51■■□□□ 1.19
Rtp1Q8C8C1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Rtp1Q8C8C1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rtp1Q8C8C1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC22.51■■□□□ 1.19
Rtp1Q8C8C1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rtp1Q8C8C1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC22.51■■□□□ 1.19
Rtp1Q8C8C1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rtp1Q8C8C1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Rtp1Q8C8C1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rtp1Q8C8C1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Rtp1Q8C8C1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC22.5■■□□□ 1.19
Rtp1Q8C8C1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC22.5■■□□□ 1.19
Rtp1Q8C8C1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rtp1Q8C8C1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rtp1Q8C8C1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rtp1Q8C8C1 Gm6420-201ENSMUST00000193885 723 ntBASIC22.5■■□□□ 1.19
Rtp1Q8C8C1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rtp1Q8C8C1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rtp1Q8C8C1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Rtp1Q8C8C1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.49■■□□□ 1.19
Rtp1Q8C8C1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Rtp1Q8C8C1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rtp1Q8C8C1 Gm6211-202ENSMUST00000167849 925 ntBASIC22.49■■□□□ 1.19
Rtp1Q8C8C1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rtp1Q8C8C1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rtp1Q8C8C1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rtp1Q8C8C1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rtp1Q8C8C1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rtp1Q8C8C1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Rtp1Q8C8C1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Rtp1Q8C8C1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rtp1Q8C8C1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rtp1Q8C8C1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rtp1Q8C8C1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Rtp1Q8C8C1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rtp1Q8C8C1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC22.47■■□□□ 1.19
Rtp1Q8C8C1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rtp1Q8C8C1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Rtp1Q8C8C1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rtp1Q8C8C1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rtp1Q8C8C1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rtp1Q8C8C1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC22.46■■□□□ 1.19
Rtp1Q8C8C1 AC122769.4-201ENSMUST00000228166 901 ntBASIC22.46■■□□□ 1.19
Rtp1Q8C8C1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rtp1Q8C8C1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Rtp1Q8C8C1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Rtp1Q8C8C1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rtp1Q8C8C1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC22.45■■□□□ 1.18
Rtp1Q8C8C1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rtp1Q8C8C1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC22.45■■□□□ 1.18
Rtp1Q8C8C1 CT010467.1-202ENSMUST00000205406 714 ntBASIC22.45■■□□□ 1.18
Rtp1Q8C8C1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC22.45■■□□□ 1.18
Rtp1Q8C8C1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC22.45■■□□□ 1.18
Rtp1Q8C8C1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rtp1Q8C8C1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rtp1Q8C8C1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rtp1Q8C8C1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rtp1Q8C8C1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rtp1Q8C8C1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rtp1Q8C8C1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC22.44■■□□□ 1.18
Rtp1Q8C8C1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rtp1Q8C8C1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rtp1Q8C8C1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC22.44■■□□□ 1.18
Rtp1Q8C8C1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC22.44■■□□□ 1.18
Rtp1Q8C8C1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rtp1Q8C8C1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC22.44■■□□□ 1.18
Rtp1Q8C8C1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Rtp1Q8C8C1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rtp1Q8C8C1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rtp1Q8C8C1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rtp1Q8C8C1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Rtp1Q8C8C1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rtp1Q8C8C1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rtp1Q8C8C1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rtp1Q8C8C1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rtp1Q8C8C1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rtp1Q8C8C1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rtp1Q8C8C1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rtp1Q8C8C1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rtp1Q8C8C1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rtp1Q8C8C1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rtp1Q8C8C1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Rtp1Q8C8C1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms