Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col6a6Q8C6K9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col6a6Q8C6K9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col6a6Q8C6K9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col6a6Q8C6K9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Col6a6Q8C6K9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.7■□□□□ 0.42
Col6a6Q8C6K9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col6a6Q8C6K9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col6a6Q8C6K9 Gm26524-201ENSMUST00000192339 390 ntBASIC17.7■□□□□ 0.42
Col6a6Q8C6K9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.7■□□□□ 0.42
Col6a6Q8C6K9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.7■□□□□ 0.42
Col6a6Q8C6K9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col6a6Q8C6K9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col6a6Q8C6K9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col6a6Q8C6K9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col6a6Q8C6K9 Gm13534-201ENSMUST00000121169 513 ntBASIC17.69■□□□□ 0.42
Col6a6Q8C6K9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Col6a6Q8C6K9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col6a6Q8C6K9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col6a6Q8C6K9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col6a6Q8C6K9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col6a6Q8C6K9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Col6a6Q8C6K9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.69■□□□□ 0.42
Col6a6Q8C6K9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.69■□□□□ 0.42
Col6a6Q8C6K9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.69■□□□□ 0.42
Col6a6Q8C6K9 Gm6420-201ENSMUST00000193885 723 ntBASIC17.69■□□□□ 0.42
Col6a6Q8C6K9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col6a6Q8C6K9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col6a6Q8C6K9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col6a6Q8C6K9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
Col6a6Q8C6K9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col6a6Q8C6K9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.68■□□□□ 0.42
Col6a6Q8C6K9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Col6a6Q8C6K9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col6a6Q8C6K9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col6a6Q8C6K9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.68■□□□□ 0.42
Col6a6Q8C6K9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col6a6Q8C6K9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col6a6Q8C6K9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col6a6Q8C6K9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.68■□□□□ 0.42
Col6a6Q8C6K9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Col6a6Q8C6K9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Col6a6Q8C6K9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col6a6Q8C6K9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col6a6Q8C6K9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Col6a6Q8C6K9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col6a6Q8C6K9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col6a6Q8C6K9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col6a6Q8C6K9 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.67■□□□□ 0.42
Col6a6Q8C6K9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Col6a6Q8C6K9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col6a6Q8C6K9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col6a6Q8C6K9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.67■□□□□ 0.42
Col6a6Q8C6K9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col6a6Q8C6K9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col6a6Q8C6K9 Gm715-201ENSMUST00000117865 831 ntBASIC17.67■□□□□ 0.42
Col6a6Q8C6K9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Col6a6Q8C6K9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col6a6Q8C6K9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col6a6Q8C6K9 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.66■□□□□ 0.42
Col6a6Q8C6K9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Col6a6Q8C6K9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col6a6Q8C6K9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col6a6Q8C6K9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col6a6Q8C6K9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Col6a6Q8C6K9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col6a6Q8C6K9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Col6a6Q8C6K9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.65■□□□□ 0.42
Col6a6Q8C6K9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col6a6Q8C6K9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col6a6Q8C6K9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col6a6Q8C6K9 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.65■□□□□ 0.42
Col6a6Q8C6K9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.65■□□□□ 0.42
Col6a6Q8C6K9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col6a6Q8C6K9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col6a6Q8C6K9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col6a6Q8C6K9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Col6a6Q8C6K9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Col6a6Q8C6K9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col6a6Q8C6K9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col6a6Q8C6K9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col6a6Q8C6K9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.64■□□□□ 0.41
Col6a6Q8C6K9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col6a6Q8C6K9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.64■□□□□ 0.41
Col6a6Q8C6K9 Trmt13-210ENSMUST00000198454 880 ntBASIC17.64■□□□□ 0.41
Col6a6Q8C6K9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col6a6Q8C6K9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col6a6Q8C6K9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Col6a6Q8C6K9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Col6a6Q8C6K9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Col6a6Q8C6K9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.64■□□□□ 0.41
Col6a6Q8C6K9 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.64■□□□□ 0.41
Col6a6Q8C6K9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col6a6Q8C6K9 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.64■□□□□ 0.41
Col6a6Q8C6K9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col6a6Q8C6K9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.63■□□□□ 0.41
Col6a6Q8C6K9 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.63■□□□□ 0.41
Col6a6Q8C6K9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col6a6Q8C6K9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col6a6Q8C6K9 Mir6982-201ENSMUST00000184354 68 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms