Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Sh3rf3Q8C120 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.36■□□□□ 0.85
Sh3rf3Q8C120 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3rf3Q8C120 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.35■□□□□ 0.85
Sh3rf3Q8C120 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3rf3Q8C120 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3rf3Q8C120 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Sh3rf3Q8C120 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3rf3Q8C120 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3rf3Q8C120 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3rf3Q8C120 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3rf3Q8C120 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Sh3rf3Q8C120 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3rf3Q8C120 Gm12251-201ENSMUST00000117893 792 ntBASIC20.34■□□□□ 0.85
Sh3rf3Q8C120 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Sh3rf3Q8C120 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3rf3Q8C120 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3rf3Q8C120 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3rf3Q8C120 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.34■□□□□ 0.85
Sh3rf3Q8C120 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3rf3Q8C120 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sh3rf3Q8C120 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sh3rf3Q8C120 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sh3rf3Q8C120 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Sh3rf3Q8C120 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sh3rf3Q8C120 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sh3rf3Q8C120 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.33■□□□□ 0.85
Sh3rf3Q8C120 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sh3rf3Q8C120 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
Sh3rf3Q8C120 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sh3rf3Q8C120 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sh3rf3Q8C120 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3rf3Q8C120 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3rf3Q8C120 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Sh3rf3Q8C120 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3rf3Q8C120 Gm15039-201ENSMUST00000118914 875 ntBASIC20.32■□□□□ 0.84
Sh3rf3Q8C120 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3rf3Q8C120 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.32■□□□□ 0.84
Sh3rf3Q8C120 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3rf3Q8C120 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3rf3Q8C120 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3rf3Q8C120 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3rf3Q8C120 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Sh3rf3Q8C120 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3rf3Q8C120 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Sh3rf3Q8C120 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.31■□□□□ 0.84
Sh3rf3Q8C120 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3rf3Q8C120 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Sh3rf3Q8C120 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3rf3Q8C120 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3rf3Q8C120 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3rf3Q8C120 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.31■□□□□ 0.84
Sh3rf3Q8C120 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3rf3Q8C120 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.31■□□□□ 0.84
Sh3rf3Q8C120 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3rf3Q8C120 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.31■□□□□ 0.84
Sh3rf3Q8C120 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3rf3Q8C120 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3rf3Q8C120 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Sh3rf3Q8C120 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.3■□□□□ 0.84
Sh3rf3Q8C120 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Sh3rf3Q8C120 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.3■□□□□ 0.84
Sh3rf3Q8C120 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Sh3rf3Q8C120 Gm27454-201ENSMUST00000185090 204 ntBASIC20.29■□□□□ 0.84
Sh3rf3Q8C120 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3rf3Q8C120 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.28■□□□□ 0.84
Sh3rf3Q8C120 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.28■□□□□ 0.84
Sh3rf3Q8C120 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3rf3Q8C120 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Sh3rf3Q8C120 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Sh3rf3Q8C120 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3rf3Q8C120 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3rf3Q8C120 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3rf3Q8C120 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Sh3rf3Q8C120 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3rf3Q8C120 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3rf3Q8C120 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3rf3Q8C120 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.28■□□□□ 0.84
Sh3rf3Q8C120 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3rf3Q8C120 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.28■□□□□ 0.84
Sh3rf3Q8C120 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3rf3Q8C120 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3rf3Q8C120 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.27■□□□□ 0.84
Sh3rf3Q8C120 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Sh3rf3Q8C120 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Sh3rf3Q8C120 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sh3rf3Q8C120 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3rf3Q8C120 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3rf3Q8C120 AA386476-201ENSMUST00000098781 1665 ntBASIC20.26■□□□□ 0.83
Sh3rf3Q8C120 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3rf3Q8C120 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3rf3Q8C120 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3rf3Q8C120 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Sh3rf3Q8C120 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3rf3Q8C120 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3rf3Q8C120 Spcs1-204ENSMUST00000226782 949 ntBASIC20.26■□□□□ 0.83
Sh3rf3Q8C120 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3rf3Q8C120 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3rf3Q8C120 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3rf3Q8C120 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms