Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cdk5rap1Q8BTW8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdk5rap1Q8BTW8 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.56■□□□□ 0.56
Cdk5rap1Q8BTW8 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdk5rap1Q8BTW8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.56■□□□□ 0.56
Cdk5rap1Q8BTW8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdk5rap1Q8BTW8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdk5rap1Q8BTW8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdk5rap1Q8BTW8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdk5rap1Q8BTW8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdk5rap1Q8BTW8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cdk5rap1Q8BTW8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdk5rap1Q8BTW8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.55■□□□□ 0.56
Cdk5rap1Q8BTW8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.55■□□□□ 0.56
Cdk5rap1Q8BTW8 Gm10033-202ENSMUST00000211874 928 ntBASIC18.55■□□□□ 0.56
Cdk5rap1Q8BTW8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdk5rap1Q8BTW8 Gm9988-201ENSMUST00000069786 435 ntBASIC18.55■□□□□ 0.56
Cdk5rap1Q8BTW8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdk5rap1Q8BTW8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdk5rap1Q8BTW8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdk5rap1Q8BTW8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.55■□□□□ 0.56
Cdk5rap1Q8BTW8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdk5rap1Q8BTW8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.54■□□□□ 0.56
Cdk5rap1Q8BTW8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cdk5rap1Q8BTW8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cdk5rap1Q8BTW8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cdk5rap1Q8BTW8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cdk5rap1Q8BTW8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.54■□□□□ 0.56
Cdk5rap1Q8BTW8 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdk5rap1Q8BTW8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdk5rap1Q8BTW8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdk5rap1Q8BTW8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdk5rap1Q8BTW8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdk5rap1Q8BTW8 Gm7291-201ENSMUST00000199147 382 ntBASIC18.54■□□□□ 0.56
Cdk5rap1Q8BTW8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cdk5rap1Q8BTW8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdk5rap1Q8BTW8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdk5rap1Q8BTW8 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdk5rap1Q8BTW8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdk5rap1Q8BTW8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdk5rap1Q8BTW8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdk5rap1Q8BTW8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Cdk5rap1Q8BTW8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.53■□□□□ 0.56
Cdk5rap1Q8BTW8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.53■□□□□ 0.56
Cdk5rap1Q8BTW8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdk5rap1Q8BTW8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.53■□□□□ 0.56
Cdk5rap1Q8BTW8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdk5rap1Q8BTW8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdk5rap1Q8BTW8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdk5rap1Q8BTW8 Gm27405-201ENSMUST00000184201 112 ntBASIC18.53■□□□□ 0.56
Cdk5rap1Q8BTW8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdk5rap1Q8BTW8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdk5rap1Q8BTW8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Cdk5rap1Q8BTW8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Cdk5rap1Q8BTW8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Cdk5rap1Q8BTW8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdk5rap1Q8BTW8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Cdk5rap1Q8BTW8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdk5rap1Q8BTW8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdk5rap1Q8BTW8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cdk5rap1Q8BTW8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cdk5rap1Q8BTW8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cdk5rap1Q8BTW8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.52■□□□□ 0.56
Cdk5rap1Q8BTW8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.52■□□□□ 0.56
Cdk5rap1Q8BTW8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.52■□□□□ 0.56
Cdk5rap1Q8BTW8 AA386476-201ENSMUST00000098781 1665 ntBASIC18.52■□□□□ 0.56
Cdk5rap1Q8BTW8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdk5rap1Q8BTW8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cdk5rap1Q8BTW8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdk5rap1Q8BTW8 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.52■□□□□ 0.55
Cdk5rap1Q8BTW8 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Cdk5rap1Q8BTW8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdk5rap1Q8BTW8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdk5rap1Q8BTW8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Cdk5rap1Q8BTW8 AV356131-201ENSMUST00000206201 750 ntBASIC18.51■□□□□ 0.55
Cdk5rap1Q8BTW8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdk5rap1Q8BTW8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.51■□□□□ 0.55
Cdk5rap1Q8BTW8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cdk5rap1Q8BTW8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdk5rap1Q8BTW8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdk5rap1Q8BTW8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdk5rap1Q8BTW8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Cdk5rap1Q8BTW8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdk5rap1Q8BTW8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Cdk5rap1Q8BTW8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdk5rap1Q8BTW8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Cdk5rap1Q8BTW8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdk5rap1Q8BTW8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdk5rap1Q8BTW8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.49■□□□□ 0.55
Cdk5rap1Q8BTW8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cdk5rap1Q8BTW8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Cdk5rap1Q8BTW8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdk5rap1Q8BTW8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cdk5rap1Q8BTW8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cdk5rap1Q8BTW8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.49■□□□□ 0.55
Cdk5rap1Q8BTW8 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.49■□□□□ 0.55
Cdk5rap1Q8BTW8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdk5rap1Q8BTW8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cdk5rap1Q8BTW8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdk5rap1Q8BTW8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms