Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ppp1r3eQ8BRJ4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ppp1r3eQ8BRJ4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ppp1r3eQ8BRJ4 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.31■□□□□ 0.52
Ppp1r3eQ8BRJ4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ppp1r3eQ8BRJ4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ppp1r3eQ8BRJ4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.31■□□□□ 0.52
Ppp1r3eQ8BRJ4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ppp1r3eQ8BRJ4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ppp1r3eQ8BRJ4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ppp1r3eQ8BRJ4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ppp1r3eQ8BRJ4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ppp1r3eQ8BRJ4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ppp1r3eQ8BRJ4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ppp1r3eQ8BRJ4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ppp1r3eQ8BRJ4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ppp1r3eQ8BRJ4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Ppp1r3eQ8BRJ4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ppp1r3eQ8BRJ4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ppp1r3eQ8BRJ4 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.3■□□□□ 0.52
Ppp1r3eQ8BRJ4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ppp1r3eQ8BRJ4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ppp1r3eQ8BRJ4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ppp1r3eQ8BRJ4 BC021767-201ENSMUST00000126387 1716 ntBASIC18.29■□□□□ 0.52
Ppp1r3eQ8BRJ4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.29■□□□□ 0.52
Ppp1r3eQ8BRJ4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ppp1r3eQ8BRJ4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Ppp1r3eQ8BRJ4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ppp1r3eQ8BRJ4 Gm40881-201ENSMUST00000223397 166 ntBASIC18.29■□□□□ 0.52
Ppp1r3eQ8BRJ4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ppp1r3eQ8BRJ4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ppp1r3eQ8BRJ4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ppp1r3eQ8BRJ4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ppp1r3eQ8BRJ4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ppp1r3eQ8BRJ4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ppp1r3eQ8BRJ4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ppp1r3eQ8BRJ4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.28■□□□□ 0.52
Ppp1r3eQ8BRJ4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ppp1r3eQ8BRJ4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ppp1r3eQ8BRJ4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Ppp1r3eQ8BRJ4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ppp1r3eQ8BRJ4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ppp1r3eQ8BRJ4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Ppp1r3eQ8BRJ4 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.28■□□□□ 0.52
Ppp1r3eQ8BRJ4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ppp1r3eQ8BRJ4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ppp1r3eQ8BRJ4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ppp1r3eQ8BRJ4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.27■□□□□ 0.52
Ppp1r3eQ8BRJ4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ppp1r3eQ8BRJ4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ppp1r3eQ8BRJ4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.27■□□□□ 0.52
Ppp1r3eQ8BRJ4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.27■□□□□ 0.52
Ppp1r3eQ8BRJ4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ppp1r3eQ8BRJ4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ppp1r3eQ8BRJ4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ppp1r3eQ8BRJ4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ppp1r3eQ8BRJ4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ppp1r3eQ8BRJ4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.27■□□□□ 0.51
Ppp1r3eQ8BRJ4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ppp1r3eQ8BRJ4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ppp1r3eQ8BRJ4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ppp1r3eQ8BRJ4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ppp1r3eQ8BRJ4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ppp1r3eQ8BRJ4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ppp1r3eQ8BRJ4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ppp1r3eQ8BRJ4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ppp1r3eQ8BRJ4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.26■□□□□ 0.51
Ppp1r3eQ8BRJ4 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.26■□□□□ 0.51
Ppp1r3eQ8BRJ4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ppp1r3eQ8BRJ4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ppp1r3eQ8BRJ4 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ppp1r3eQ8BRJ4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ppp1r3eQ8BRJ4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
Ppp1r3eQ8BRJ4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ppp1r3eQ8BRJ4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ppp1r3eQ8BRJ4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ppp1r3eQ8BRJ4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Ppp1r3eQ8BRJ4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ppp1r3eQ8BRJ4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ppp1r3eQ8BRJ4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.25■□□□□ 0.51
Ppp1r3eQ8BRJ4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ppp1r3eQ8BRJ4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ppp1r3eQ8BRJ4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ppp1r3eQ8BRJ4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ppp1r3eQ8BRJ4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ppp1r3eQ8BRJ4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ppp1r3eQ8BRJ4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.25■□□□□ 0.51
Ppp1r3eQ8BRJ4 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.25■□□□□ 0.51
Ppp1r3eQ8BRJ4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ppp1r3eQ8BRJ4 Gm9870-201ENSMUST00000063874 645 ntBASIC18.25■□□□□ 0.51
Ppp1r3eQ8BRJ4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ppp1r3eQ8BRJ4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ppp1r3eQ8BRJ4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ppp1r3eQ8BRJ4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ppp1r3eQ8BRJ4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ppp1r3eQ8BRJ4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ppp1r3eQ8BRJ4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ppp1r3eQ8BRJ4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ppp1r3eQ8BRJ4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ppp1r3eQ8BRJ4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms