Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Suds3Q8BR65 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Suds3Q8BR65 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Suds3Q8BR65 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Suds3Q8BR65 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Suds3Q8BR65 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Suds3Q8BR65 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Suds3Q8BR65 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Suds3Q8BR65 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Suds3Q8BR65 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Suds3Q8BR65 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Suds3Q8BR65 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Suds3Q8BR65 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.93■□□□□ 0.78
Suds3Q8BR65 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Suds3Q8BR65 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Suds3Q8BR65 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Suds3Q8BR65 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Suds3Q8BR65 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Suds3Q8BR65 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Suds3Q8BR65 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Suds3Q8BR65 Gm43137-201ENSMUST00000198052 594 ntBASIC19.92■□□□□ 0.78
Suds3Q8BR65 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Suds3Q8BR65 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Suds3Q8BR65 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Suds3Q8BR65 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Suds3Q8BR65 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.92■□□□□ 0.78
Suds3Q8BR65 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Suds3Q8BR65 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.91■□□□□ 0.78
Suds3Q8BR65 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Suds3Q8BR65 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Suds3Q8BR65 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Suds3Q8BR65 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Suds3Q8BR65 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Suds3Q8BR65 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Suds3Q8BR65 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Suds3Q8BR65 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Suds3Q8BR65 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Suds3Q8BR65 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Suds3Q8BR65 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Suds3Q8BR65 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Suds3Q8BR65 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Suds3Q8BR65 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Suds3Q8BR65 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Suds3Q8BR65 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.9■□□□□ 0.78
Suds3Q8BR65 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Suds3Q8BR65 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Suds3Q8BR65 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Suds3Q8BR65 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.9■□□□□ 0.78
Suds3Q8BR65 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Suds3Q8BR65 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Suds3Q8BR65 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Suds3Q8BR65 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Suds3Q8BR65 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Suds3Q8BR65 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Suds3Q8BR65 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Suds3Q8BR65 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.9■□□□□ 0.78
Suds3Q8BR65 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Suds3Q8BR65 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.9■□□□□ 0.78
Suds3Q8BR65 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Suds3Q8BR65 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Suds3Q8BR65 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Suds3Q8BR65 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.89■□□□□ 0.77
Suds3Q8BR65 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Suds3Q8BR65 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.89■□□□□ 0.77
Suds3Q8BR65 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Suds3Q8BR65 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Suds3Q8BR65 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Suds3Q8BR65 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Suds3Q8BR65 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Suds3Q8BR65 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Suds3Q8BR65 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Suds3Q8BR65 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Suds3Q8BR65 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Suds3Q8BR65 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Suds3Q8BR65 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Suds3Q8BR65 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.88■□□□□ 0.77
Suds3Q8BR65 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.88■□□□□ 0.77
Suds3Q8BR65 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Suds3Q8BR65 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Suds3Q8BR65 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Suds3Q8BR65 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Suds3Q8BR65 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Suds3Q8BR65 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.87■□□□□ 0.77
Suds3Q8BR65 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Suds3Q8BR65 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.87■□□□□ 0.77
Suds3Q8BR65 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Suds3Q8BR65 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Suds3Q8BR65 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Suds3Q8BR65 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Suds3Q8BR65 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Suds3Q8BR65 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Suds3Q8BR65 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
Suds3Q8BR65 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Suds3Q8BR65 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.86■□□□□ 0.77
Suds3Q8BR65 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Suds3Q8BR65 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.86■□□□□ 0.77
Suds3Q8BR65 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Suds3Q8BR65 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Suds3Q8BR65 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.86■□□□□ 0.77
Suds3Q8BR65 Mir6236-201ENSMUST00000184437 123 ntBASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms