Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Gm15820-201ENSMUST00000201566 728 ntBASIC17.05■□□□□ 0.32
Cdhr3Q8BL00 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdhr3Q8BL00 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cdhr3Q8BL00 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdhr3Q8BL00 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cdhr3Q8BL00 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cdhr3Q8BL00 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdhr3Q8BL00 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdhr3Q8BL00 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cdhr3Q8BL00 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdhr3Q8BL00 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdhr3Q8BL00 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdhr3Q8BL00 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdhr3Q8BL00 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdhr3Q8BL00 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdhr3Q8BL00 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cdhr3Q8BL00 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdhr3Q8BL00 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdhr3Q8BL00 Golph3-205ENSMUST00000228671 2842 ntBASIC17.03■□□□□ 0.32
Cdhr3Q8BL00 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdhr3Q8BL00 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdhr3Q8BL00 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdhr3Q8BL00 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdhr3Q8BL00 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdhr3Q8BL00 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cdhr3Q8BL00 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.03■□□□□ 0.32
Cdhr3Q8BL00 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdhr3Q8BL00 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdhr3Q8BL00 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdhr3Q8BL00 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cdhr3Q8BL00 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cdhr3Q8BL00 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdhr3Q8BL00 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdhr3Q8BL00 Gm7417-201ENSMUST00000192950 473 ntBASIC17.02■□□□□ 0.32
Cdhr3Q8BL00 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Cdhr3Q8BL00 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdhr3Q8BL00 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdhr3Q8BL00 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdhr3Q8BL00 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Cdhr3Q8BL00 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdhr3Q8BL00 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cdhr3Q8BL00 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.01■□□□□ 0.31
Cdhr3Q8BL00 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdhr3Q8BL00 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cdhr3Q8BL00 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdhr3Q8BL00 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Cdhr3Q8BL00 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Cdhr3Q8BL00 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdhr3Q8BL00 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdhr3Q8BL00 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cdhr3Q8BL00 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cdhr3Q8BL00 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17■□□□□ 0.31
Cdhr3Q8BL00 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdhr3Q8BL00 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdhr3Q8BL00 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdhr3Q8BL00 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdhr3Q8BL00 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdhr3Q8BL00 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdhr3Q8BL00 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdhr3Q8BL00 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdhr3Q8BL00 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.99■□□□□ 0.31
Cdhr3Q8BL00 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdhr3Q8BL00 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Cdhr3Q8BL00 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdhr3Q8BL00 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
Cdhr3Q8BL00 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdhr3Q8BL00 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdhr3Q8BL00 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.99■□□□□ 0.31
Cdhr3Q8BL00 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Cdhr3Q8BL00 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdhr3Q8BL00 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.99■□□□□ 0.31
Cdhr3Q8BL00 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Cdhr3Q8BL00 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdhr3Q8BL00 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdhr3Q8BL00 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdhr3Q8BL00 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdhr3Q8BL00 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdhr3Q8BL00 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdhr3Q8BL00 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdhr3Q8BL00 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cdhr3Q8BL00 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Cdhr3Q8BL00 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.98■□□□□ 0.31
Cdhr3Q8BL00 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Cdhr3Q8BL00 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cdhr3Q8BL00 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdhr3Q8BL00 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Cdhr3Q8BL00 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdhr3Q8BL00 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.98■□□□□ 0.31
Cdhr3Q8BL00 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdhr3Q8BL00 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdhr3Q8BL00 AA386476-201ENSMUST00000098781 1665 ntBASIC16.97■□□□□ 0.31
Cdhr3Q8BL00 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdhr3Q8BL00 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdhr3Q8BL00 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdhr3Q8BL00 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdhr3Q8BL00 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Cdhr3Q8BL00 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.97■□□□□ 0.31
Cdhr3Q8BL00 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdhr3Q8BL00 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cdhr3Q8BL00 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms