Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clrn3Q8BHH8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clrn3Q8BHH8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.26■□□□□ 0.51
Clrn3Q8BHH8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clrn3Q8BHH8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clrn3Q8BHH8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clrn3Q8BHH8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Clrn3Q8BHH8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clrn3Q8BHH8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clrn3Q8BHH8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Clrn3Q8BHH8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clrn3Q8BHH8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Clrn3Q8BHH8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clrn3Q8BHH8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clrn3Q8BHH8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Clrn3Q8BHH8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Clrn3Q8BHH8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Clrn3Q8BHH8 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.25■□□□□ 0.51
Clrn3Q8BHH8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clrn3Q8BHH8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Clrn3Q8BHH8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clrn3Q8BHH8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clrn3Q8BHH8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clrn3Q8BHH8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Clrn3Q8BHH8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clrn3Q8BHH8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clrn3Q8BHH8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clrn3Q8BHH8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Clrn3Q8BHH8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.24■□□□□ 0.51
Clrn3Q8BHH8 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.24■□□□□ 0.51
Clrn3Q8BHH8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clrn3Q8BHH8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clrn3Q8BHH8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clrn3Q8BHH8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.23■□□□□ 0.51
Clrn3Q8BHH8 Gm12821-201ENSMUST00000120022 600 ntBASIC18.23■□□□□ 0.51
Clrn3Q8BHH8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.23■□□□□ 0.51
Clrn3Q8BHH8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clrn3Q8BHH8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clrn3Q8BHH8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clrn3Q8BHH8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Clrn3Q8BHH8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.22■□□□□ 0.51
Clrn3Q8BHH8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn3Q8BHH8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn3Q8BHH8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn3Q8BHH8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Clrn3Q8BHH8 Gm21956-201ENSMUST00000179946 522 ntBASIC18.22■□□□□ 0.51
Clrn3Q8BHH8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn3Q8BHH8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn3Q8BHH8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.22■□□□□ 0.51
Clrn3Q8BHH8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn3Q8BHH8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn3Q8BHH8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn3Q8BHH8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Clrn3Q8BHH8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.22■□□□□ 0.51
Clrn3Q8BHH8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn3Q8BHH8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clrn3Q8BHH8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Clrn3Q8BHH8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Clrn3Q8BHH8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Clrn3Q8BHH8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clrn3Q8BHH8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clrn3Q8BHH8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Clrn3Q8BHH8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clrn3Q8BHH8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.21■□□□□ 0.51
Clrn3Q8BHH8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Clrn3Q8BHH8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.21■□□□□ 0.51
Clrn3Q8BHH8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clrn3Q8BHH8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clrn3Q8BHH8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Clrn3Q8BHH8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Clrn3Q8BHH8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clrn3Q8BHH8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clrn3Q8BHH8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.2■□□□□ 0.5
Clrn3Q8BHH8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Clrn3Q8BHH8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Clrn3Q8BHH8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Clrn3Q8BHH8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clrn3Q8BHH8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clrn3Q8BHH8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clrn3Q8BHH8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clrn3Q8BHH8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clrn3Q8BHH8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clrn3Q8BHH8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.19■□□□□ 0.5
Clrn3Q8BHH8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clrn3Q8BHH8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clrn3Q8BHH8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.18■□□□□ 0.5
Clrn3Q8BHH8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clrn3Q8BHH8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clrn3Q8BHH8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clrn3Q8BHH8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clrn3Q8BHH8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Clrn3Q8BHH8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clrn3Q8BHH8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Clrn3Q8BHH8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clrn3Q8BHH8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clrn3Q8BHH8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Clrn3Q8BHH8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clrn3Q8BHH8 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.17■□□□□ 0.5
Clrn3Q8BHH8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.17■□□□□ 0.5
Clrn3Q8BHH8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms