Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim23Q8BGX0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim23Q8BGX0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.89■□□□□ 0.61
Trim23Q8BGX0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim23Q8BGX0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim23Q8BGX0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim23Q8BGX0 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.89■□□□□ 0.61
Trim23Q8BGX0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim23Q8BGX0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim23Q8BGX0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim23Q8BGX0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.88■□□□□ 0.61
Trim23Q8BGX0 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.88■□□□□ 0.61
Trim23Q8BGX0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim23Q8BGX0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim23Q8BGX0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim23Q8BGX0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Trim23Q8BGX0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim23Q8BGX0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Trim23Q8BGX0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Trim23Q8BGX0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim23Q8BGX0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trim23Q8BGX0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim23Q8BGX0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim23Q8BGX0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim23Q8BGX0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim23Q8BGX0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim23Q8BGX0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim23Q8BGX0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim23Q8BGX0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim23Q8BGX0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim23Q8BGX0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.86■□□□□ 0.61
Trim23Q8BGX0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.86■□□□□ 0.61
Trim23Q8BGX0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim23Q8BGX0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.86■□□□□ 0.61
Trim23Q8BGX0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim23Q8BGX0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim23Q8BGX0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim23Q8BGX0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.86■□□□□ 0.61
Trim23Q8BGX0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim23Q8BGX0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim23Q8BGX0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim23Q8BGX0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim23Q8BGX0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim23Q8BGX0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim23Q8BGX0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim23Q8BGX0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim23Q8BGX0 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.85■□□□□ 0.61
Trim23Q8BGX0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Trim23Q8BGX0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
Trim23Q8BGX0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim23Q8BGX0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim23Q8BGX0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim23Q8BGX0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim23Q8BGX0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim23Q8BGX0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim23Q8BGX0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.85■□□□□ 0.61
Trim23Q8BGX0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trim23Q8BGX0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim23Q8BGX0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim23Q8BGX0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.84■□□□□ 0.61
Trim23Q8BGX0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trim23Q8BGX0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.84■□□□□ 0.61
Trim23Q8BGX0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.84■□□□□ 0.61
Trim23Q8BGX0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trim23Q8BGX0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim23Q8BGX0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim23Q8BGX0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim23Q8BGX0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.84■□□□□ 0.61
Trim23Q8BGX0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim23Q8BGX0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim23Q8BGX0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim23Q8BGX0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Trim23Q8BGX0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim23Q8BGX0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Trim23Q8BGX0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim23Q8BGX0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.83■□□□□ 0.6
Trim23Q8BGX0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim23Q8BGX0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Trim23Q8BGX0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Trim23Q8BGX0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Trim23Q8BGX0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim23Q8BGX0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim23Q8BGX0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim23Q8BGX0 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.83■□□□□ 0.6
Trim23Q8BGX0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim23Q8BGX0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim23Q8BGX0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim23Q8BGX0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim23Q8BGX0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim23Q8BGX0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim23Q8BGX0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim23Q8BGX0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.82■□□□□ 0.6
Trim23Q8BGX0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim23Q8BGX0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim23Q8BGX0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim23Q8BGX0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim23Q8BGX0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim23Q8BGX0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim23Q8BGX0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trim23Q8BGX0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms