Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim65Q8BFW4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
Trim65Q8BFW4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.98■□□□□ 0.95
Trim65Q8BFW4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim65Q8BFW4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim65Q8BFW4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim65Q8BFW4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim65Q8BFW4 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.97■□□□□ 0.95
Trim65Q8BFW4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim65Q8BFW4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim65Q8BFW4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim65Q8BFW4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
Trim65Q8BFW4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim65Q8BFW4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim65Q8BFW4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim65Q8BFW4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim65Q8BFW4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim65Q8BFW4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.96■□□□□ 0.95
Trim65Q8BFW4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim65Q8BFW4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim65Q8BFW4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim65Q8BFW4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim65Q8BFW4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim65Q8BFW4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim65Q8BFW4 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim65Q8BFW4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim65Q8BFW4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Trim65Q8BFW4 Spcs1-204ENSMUST00000226782 949 ntBASIC20.95■□□□□ 0.94
Trim65Q8BFW4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Trim65Q8BFW4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim65Q8BFW4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim65Q8BFW4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.94■□□□□ 0.94
Trim65Q8BFW4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Trim65Q8BFW4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Trim65Q8BFW4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Trim65Q8BFW4 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.94■□□□□ 0.94
Trim65Q8BFW4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim65Q8BFW4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim65Q8BFW4 Gm12251-201ENSMUST00000117893 792 ntBASIC20.94■□□□□ 0.94
Trim65Q8BFW4 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.94■□□□□ 0.94
Trim65Q8BFW4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.94■□□□□ 0.94
Trim65Q8BFW4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim65Q8BFW4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim65Q8BFW4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim65Q8BFW4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Trim65Q8BFW4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim65Q8BFW4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.93■□□□□ 0.94
Trim65Q8BFW4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim65Q8BFW4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim65Q8BFW4 Gm12821-201ENSMUST00000120022 600 ntBASIC20.93■□□□□ 0.94
Trim65Q8BFW4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.93■□□□□ 0.94
Trim65Q8BFW4 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim65Q8BFW4 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim65Q8BFW4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim65Q8BFW4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Trim65Q8BFW4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Trim65Q8BFW4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim65Q8BFW4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim65Q8BFW4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim65Q8BFW4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim65Q8BFW4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim65Q8BFW4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim65Q8BFW4 Gm27454-201ENSMUST00000185090 204 ntBASIC20.92■□□□□ 0.94
Trim65Q8BFW4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Trim65Q8BFW4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Trim65Q8BFW4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Trim65Q8BFW4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Trim65Q8BFW4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim65Q8BFW4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Trim65Q8BFW4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim65Q8BFW4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim65Q8BFW4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim65Q8BFW4 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.91■□□□□ 0.94
Trim65Q8BFW4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.91■□□□□ 0.94
Trim65Q8BFW4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Trim65Q8BFW4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim65Q8BFW4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim65Q8BFW4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim65Q8BFW4 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Trim65Q8BFW4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.9■□□□□ 0.94
Trim65Q8BFW4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim65Q8BFW4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.9■□□□□ 0.94
Trim65Q8BFW4 Mir7075-201ENSMUST00000184187 82 ntBASIC20.9■□□□□ 0.94
Trim65Q8BFW4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim65Q8BFW4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim65Q8BFW4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim65Q8BFW4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim65Q8BFW4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim65Q8BFW4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim65Q8BFW4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim65Q8BFW4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim65Q8BFW4 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.89■□□□□ 0.93
Trim65Q8BFW4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim65Q8BFW4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim65Q8BFW4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.88■□□□□ 0.93
Trim65Q8BFW4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim65Q8BFW4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim65Q8BFW4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim65Q8BFW4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim65Q8BFW4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms