Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Trim50Q810I2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Trim50Q810I2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim50Q810I2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim50Q810I2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim50Q810I2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim50Q810I2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.03■□□□□ 0.64
Trim50Q810I2 Spcs1-204ENSMUST00000226782 949 ntBASIC19.03■□□□□ 0.64
Trim50Q810I2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Trim50Q810I2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim50Q810I2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim50Q810I2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Trim50Q810I2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim50Q810I2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim50Q810I2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Trim50Q810I2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim50Q810I2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.03■□□□□ 0.64
Trim50Q810I2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim50Q810I2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Trim50Q810I2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim50Q810I2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim50Q810I2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Trim50Q810I2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim50Q810I2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim50Q810I2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim50Q810I2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim50Q810I2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Trim50Q810I2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.02■□□□□ 0.64
Trim50Q810I2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim50Q810I2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.02■□□□□ 0.63
Trim50Q810I2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
Trim50Q810I2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.02■□□□□ 0.63
Trim50Q810I2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim50Q810I2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim50Q810I2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim50Q810I2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim50Q810I2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim50Q810I2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim50Q810I2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.01■□□□□ 0.63
Trim50Q810I2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Trim50Q810I2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trim50Q810I2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim50Q810I2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19■□□□□ 0.63
Trim50Q810I2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim50Q810I2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim50Q810I2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Trim50Q810I2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim50Q810I2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim50Q810I2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim50Q810I2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim50Q810I2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim50Q810I2 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.99■□□□□ 0.63
Trim50Q810I2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.99■□□□□ 0.63
Trim50Q810I2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim50Q810I2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim50Q810I2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.99■□□□□ 0.63
Trim50Q810I2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim50Q810I2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim50Q810I2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.98■□□□□ 0.63
Trim50Q810I2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Trim50Q810I2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim50Q810I2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Trim50Q810I2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim50Q810I2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim50Q810I2 Mir7075-201ENSMUST00000184187 82 ntBASIC18.98■□□□□ 0.63
Trim50Q810I2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trim50Q810I2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim50Q810I2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim50Q810I2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim50Q810I2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Trim50Q810I2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim50Q810I2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim50Q810I2 Gm45417-201ENSMUST00000209533 758 ntBASIC18.97■□□□□ 0.63
Trim50Q810I2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim50Q810I2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim50Q810I2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim50Q810I2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.97■□□□□ 0.63
Trim50Q810I2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim50Q810I2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim50Q810I2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim50Q810I2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim50Q810I2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim50Q810I2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim50Q810I2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim50Q810I2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim50Q810I2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trim50Q810I2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim50Q810I2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trim50Q810I2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.95■□□□□ 0.62
Trim50Q810I2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim50Q810I2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim50Q810I2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.95■□□□□ 0.62
Trim50Q810I2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim50Q810I2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.95■□□□□ 0.62
Trim50Q810I2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.95■□□□□ 0.62
Trim50Q810I2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim50Q810I2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Trim50Q810I2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim50Q810I2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim50Q810I2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms