Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.14■□□□□ 0.65
Ccdc116Q80X53 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc116Q80X53 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc116Q80X53 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc116Q80X53 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc116Q80X53 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ccdc116Q80X53 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc116Q80X53 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc116Q80X53 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc116Q80X53 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
Ccdc116Q80X53 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc116Q80X53 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc116Q80X53 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc116Q80X53 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc116Q80X53 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc116Q80X53 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc116Q80X53 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc116Q80X53 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.12■□□□□ 0.65
Ccdc116Q80X53 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Ccdc116Q80X53 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.12■□□□□ 0.65
Ccdc116Q80X53 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc116Q80X53 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc116Q80X53 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc116Q80X53 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc116Q80X53 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc116Q80X53 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc116Q80X53 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc116Q80X53 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc116Q80X53 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc116Q80X53 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc116Q80X53 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc116Q80X53 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc116Q80X53 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ccdc116Q80X53 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc116Q80X53 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc116Q80X53 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc116Q80X53 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.1■□□□□ 0.65
Ccdc116Q80X53 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc116Q80X53 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.1■□□□□ 0.65
Ccdc116Q80X53 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.1■□□□□ 0.65
Ccdc116Q80X53 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc116Q80X53 Gm9847-201ENSMUST00000052528 599 ntBASIC19.1■□□□□ 0.65
Ccdc116Q80X53 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc116Q80X53 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc116Q80X53 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc116Q80X53 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc116Q80X53 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc116Q80X53 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc116Q80X53 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc116Q80X53 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc116Q80X53 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc116Q80X53 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc116Q80X53 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc116Q80X53 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc116Q80X53 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.09■□□□□ 0.65
Ccdc116Q80X53 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc116Q80X53 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc116Q80X53 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc116Q80X53 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.09■□□□□ 0.65
Ccdc116Q80X53 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ccdc116Q80X53 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc116Q80X53 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc116Q80X53 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc116Q80X53 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.08■□□□□ 0.65
Ccdc116Q80X53 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc116Q80X53 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc116Q80X53 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc116Q80X53 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc116Q80X53 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc116Q80X53 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc116Q80X53 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.07■□□□□ 0.64
Ccdc116Q80X53 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc116Q80X53 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc116Q80X53 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc116Q80X53 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc116Q80X53 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc116Q80X53 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc116Q80X53 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc116Q80X53 Gm21956-201ENSMUST00000179946 522 ntBASIC19.07■□□□□ 0.64
Ccdc116Q80X53 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.07■□□□□ 0.64
Ccdc116Q80X53 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Ccdc116Q80X53 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc116Q80X53 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc116Q80X53 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc116Q80X53 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc116Q80X53 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc116Q80X53 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc116Q80X53 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc116Q80X53 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc116Q80X53 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc116Q80X53 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Ccdc116Q80X53 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc116Q80X53 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc116Q80X53 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc116Q80X53 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.06■□□□□ 0.64
Ccdc116Q80X53 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc116Q80X53 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc116Q80X53 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ccdc116Q80X53 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc116Q80X53 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms