Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vrk1Q80X41 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vrk1Q80X41 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vrk1Q80X41 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vrk1Q80X41 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vrk1Q80X41 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vrk1Q80X41 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vrk1Q80X41 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vrk1Q80X41 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vrk1Q80X41 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vrk1Q80X41 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vrk1Q80X41 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vrk1Q80X41 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Vrk1Q80X41 Gm27011-201ENSMUST00000182352 972 ntBASIC18.65■□□□□ 0.58
Vrk1Q80X41 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Vrk1Q80X41 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.65■□□□□ 0.58
Vrk1Q80X41 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vrk1Q80X41 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vrk1Q80X41 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vrk1Q80X41 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Vrk1Q80X41 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Vrk1Q80X41 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Vrk1Q80X41 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Vrk1Q80X41 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vrk1Q80X41 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
Vrk1Q80X41 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vrk1Q80X41 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vrk1Q80X41 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vrk1Q80X41 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vrk1Q80X41 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vrk1Q80X41 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.63■□□□□ 0.57
Vrk1Q80X41 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vrk1Q80X41 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vrk1Q80X41 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Vrk1Q80X41 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vrk1Q80X41 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vrk1Q80X41 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Vrk1Q80X41 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vrk1Q80X41 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vrk1Q80X41 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vrk1Q80X41 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vrk1Q80X41 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.62■□□□□ 0.57
Vrk1Q80X41 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vrk1Q80X41 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vrk1Q80X41 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vrk1Q80X41 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.61■□□□□ 0.57
Vrk1Q80X41 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vrk1Q80X41 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vrk1Q80X41 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.61■□□□□ 0.57
Vrk1Q80X41 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.61■□□□□ 0.57
Vrk1Q80X41 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vrk1Q80X41 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vrk1Q80X41 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vrk1Q80X41 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Vrk1Q80X41 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Vrk1Q80X41 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Vrk1Q80X41 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vrk1Q80X41 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vrk1Q80X41 Gm7514-201ENSMUST00000209475 934 ntBASIC18.6■□□□□ 0.57
Vrk1Q80X41 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vrk1Q80X41 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vrk1Q80X41 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vrk1Q80X41 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vrk1Q80X41 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vrk1Q80X41 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vrk1Q80X41 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vrk1Q80X41 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Vrk1Q80X41 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vrk1Q80X41 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vrk1Q80X41 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.59■□□□□ 0.57
Vrk1Q80X41 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vrk1Q80X41 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vrk1Q80X41 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Vrk1Q80X41 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vrk1Q80X41 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vrk1Q80X41 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Vrk1Q80X41 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vrk1Q80X41 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vrk1Q80X41 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vrk1Q80X41 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.58■□□□□ 0.56
Vrk1Q80X41 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.58■□□□□ 0.56
Vrk1Q80X41 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vrk1Q80X41 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vrk1Q80X41 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vrk1Q80X41 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vrk1Q80X41 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vrk1Q80X41 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vrk1Q80X41 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vrk1Q80X41 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.57■□□□□ 0.56
Vrk1Q80X41 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Vrk1Q80X41 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Vrk1Q80X41 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vrk1Q80X41 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Vrk1Q80X41 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vrk1Q80X41 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vrk1Q80X41 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vrk1Q80X41 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vrk1Q80X41 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vrk1Q80X41 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vrk1Q80X41 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms