Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Otub1Q7TQI3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Otub1Q7TQI3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Otub1Q7TQI3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Otub1Q7TQI3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Otub1Q7TQI3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Otub1Q7TQI3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Otub1Q7TQI3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Otub1Q7TQI3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.57■□□□□ 0.56
Otub1Q7TQI3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Otub1Q7TQI3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Otub1Q7TQI3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Otub1Q7TQI3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Otub1Q7TQI3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Otub1Q7TQI3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Otub1Q7TQI3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.56■□□□□ 0.56
Otub1Q7TQI3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Otub1Q7TQI3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Otub1Q7TQI3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Otub1Q7TQI3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Otub1Q7TQI3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Otub1Q7TQI3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Otub1Q7TQI3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Otub1Q7TQI3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Otub1Q7TQI3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.55■□□□□ 0.56
Otub1Q7TQI3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
Otub1Q7TQI3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Otub1Q7TQI3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Otub1Q7TQI3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Otub1Q7TQI3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.55■□□□□ 0.56
Otub1Q7TQI3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Otub1Q7TQI3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Otub1Q7TQI3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Otub1Q7TQI3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Otub1Q7TQI3 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Otub1Q7TQI3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Otub1Q7TQI3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Otub1Q7TQI3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Otub1Q7TQI3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Otub1Q7TQI3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.54■□□□□ 0.56
Otub1Q7TQI3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Otub1Q7TQI3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Otub1Q7TQI3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Otub1Q7TQI3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Otub1Q7TQI3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Otub1Q7TQI3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Otub1Q7TQI3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Otub1Q7TQI3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Otub1Q7TQI3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Otub1Q7TQI3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Otub1Q7TQI3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Otub1Q7TQI3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.53■□□□□ 0.56
Otub1Q7TQI3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Otub1Q7TQI3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Otub1Q7TQI3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Otub1Q7TQI3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Otub1Q7TQI3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Otub1Q7TQI3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Otub1Q7TQI3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Otub1Q7TQI3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.52■□□□□ 0.56
Otub1Q7TQI3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.52■□□□□ 0.56
Otub1Q7TQI3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Otub1Q7TQI3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Otub1Q7TQI3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Otub1Q7TQI3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Otub1Q7TQI3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Otub1Q7TQI3 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.52■□□□□ 0.55
Otub1Q7TQI3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Otub1Q7TQI3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Otub1Q7TQI3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Otub1Q7TQI3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Otub1Q7TQI3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Otub1Q7TQI3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Otub1Q7TQI3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Otub1Q7TQI3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Otub1Q7TQI3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Otub1Q7TQI3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Otub1Q7TQI3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.51■□□□□ 0.55
Otub1Q7TQI3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Otub1Q7TQI3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Otub1Q7TQI3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Otub1Q7TQI3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Otub1Q7TQI3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Otub1Q7TQI3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Otub1Q7TQI3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Otub1Q7TQI3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Otub1Q7TQI3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Otub1Q7TQI3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.5■□□□□ 0.55
Otub1Q7TQI3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Otub1Q7TQI3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.5■□□□□ 0.55
Otub1Q7TQI3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.5■□□□□ 0.55
Otub1Q7TQI3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.5■□□□□ 0.55
Otub1Q7TQI3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Otub1Q7TQI3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Otub1Q7TQI3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Otub1Q7TQI3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Otub1Q7TQI3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Otub1Q7TQI3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Otub1Q7TQI3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Otub1Q7TQI3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms