Protein–RNA interactions for Protein: Q7TNM2

Trim46, Tripartite motif-containing protein 46, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim46Q7TNM2 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.34■□□□□ 0.53
Trim46Q7TNM2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim46Q7TNM2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim46Q7TNM2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim46Q7TNM2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim46Q7TNM2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim46Q7TNM2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim46Q7TNM2 Gm21956-201ENSMUST00000179946 522 ntBASIC18.33■□□□□ 0.52
Trim46Q7TNM2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.33■□□□□ 0.52
Trim46Q7TNM2 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.33■□□□□ 0.52
Trim46Q7TNM2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim46Q7TNM2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim46Q7TNM2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim46Q7TNM2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Trim46Q7TNM2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Trim46Q7TNM2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Trim46Q7TNM2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Trim46Q7TNM2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim46Q7TNM2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim46Q7TNM2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Trim46Q7TNM2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim46Q7TNM2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trim46Q7TNM2 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.32■□□□□ 0.52
Trim46Q7TNM2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim46Q7TNM2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim46Q7TNM2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trim46Q7TNM2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Trim46Q7TNM2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim46Q7TNM2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim46Q7TNM2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim46Q7TNM2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim46Q7TNM2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim46Q7TNM2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Trim46Q7TNM2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim46Q7TNM2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.31■□□□□ 0.52
Trim46Q7TNM2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trim46Q7TNM2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim46Q7TNM2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim46Q7TNM2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trim46Q7TNM2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim46Q7TNM2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim46Q7TNM2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim46Q7TNM2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim46Q7TNM2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim46Q7TNM2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim46Q7TNM2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim46Q7TNM2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim46Q7TNM2 Gm43137-201ENSMUST00000198052 594 ntBASIC18.29■□□□□ 0.52
Trim46Q7TNM2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.29■□□□□ 0.52
Trim46Q7TNM2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim46Q7TNM2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trim46Q7TNM2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim46Q7TNM2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim46Q7TNM2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim46Q7TNM2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim46Q7TNM2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim46Q7TNM2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim46Q7TNM2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim46Q7TNM2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim46Q7TNM2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim46Q7TNM2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim46Q7TNM2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.28■□□□□ 0.52
Trim46Q7TNM2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim46Q7TNM2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim46Q7TNM2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim46Q7TNM2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Trim46Q7TNM2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim46Q7TNM2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim46Q7TNM2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trim46Q7TNM2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim46Q7TNM2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Trim46Q7TNM2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim46Q7TNM2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim46Q7TNM2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Trim46Q7TNM2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim46Q7TNM2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.26■□□□□ 0.51
Trim46Q7TNM2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim46Q7TNM2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.26■□□□□ 0.51
Trim46Q7TNM2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim46Q7TNM2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim46Q7TNM2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim46Q7TNM2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim46Q7TNM2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trim46Q7TNM2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim46Q7TNM2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim46Q7TNM2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim46Q7TNM2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim46Q7TNM2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim46Q7TNM2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim46Q7TNM2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim46Q7TNM2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim46Q7TNM2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Trim46Q7TNM2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim46Q7TNM2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim46Q7TNM2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim46Q7TNM2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim46Q7TNM2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
Trim46Q7TNM2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim46Q7TNM2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Trim46Q7TNM2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms