Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf139Q7TMV1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
Rnf139Q7TMV1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf139Q7TMV1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.97■□□□□ 0.95
Rnf139Q7TMV1 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.97■□□□□ 0.95
Rnf139Q7TMV1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf139Q7TMV1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf139Q7TMV1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf139Q7TMV1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf139Q7TMV1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf139Q7TMV1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Rnf139Q7TMV1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf139Q7TMV1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Rnf139Q7TMV1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf139Q7TMV1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf139Q7TMV1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf139Q7TMV1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Rnf139Q7TMV1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Rnf139Q7TMV1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Rnf139Q7TMV1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Rnf139Q7TMV1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf139Q7TMV1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.95■□□□□ 0.94
Rnf139Q7TMV1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.95■□□□□ 0.94
Rnf139Q7TMV1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Rnf139Q7TMV1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf139Q7TMV1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf139Q7TMV1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.95■□□□□ 0.94
Rnf139Q7TMV1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rnf139Q7TMV1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf139Q7TMV1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf139Q7TMV1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf139Q7TMV1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf139Q7TMV1 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.94■□□□□ 0.94
Rnf139Q7TMV1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf139Q7TMV1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf139Q7TMV1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.94■□□□□ 0.94
Rnf139Q7TMV1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf139Q7TMV1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Rnf139Q7TMV1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.93■□□□□ 0.94
Rnf139Q7TMV1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf139Q7TMV1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Rnf139Q7TMV1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Rnf139Q7TMV1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf139Q7TMV1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf139Q7TMV1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf139Q7TMV1 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.92■□□□□ 0.94
Rnf139Q7TMV1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf139Q7TMV1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
Rnf139Q7TMV1 Gm11421-201ENSMUST00000122124 294 ntBASIC20.92■□□□□ 0.94
Rnf139Q7TMV1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.92■□□□□ 0.94
Rnf139Q7TMV1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Rnf139Q7TMV1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf139Q7TMV1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf139Q7TMV1 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.92■□□□□ 0.94
Rnf139Q7TMV1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.92■□□□□ 0.94
Rnf139Q7TMV1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf139Q7TMV1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf139Q7TMV1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf139Q7TMV1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf139Q7TMV1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Rnf139Q7TMV1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf139Q7TMV1 Gm26833-201ENSMUST00000180899 440 ntBASIC20.91■□□□□ 0.94
Rnf139Q7TMV1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Rnf139Q7TMV1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf139Q7TMV1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf139Q7TMV1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf139Q7TMV1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf139Q7TMV1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf139Q7TMV1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.91■□□□□ 0.94
Rnf139Q7TMV1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf139Q7TMV1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf139Q7TMV1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf139Q7TMV1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
Rnf139Q7TMV1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.9■□□□□ 0.94
Rnf139Q7TMV1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf139Q7TMV1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf139Q7TMV1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rnf139Q7TMV1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rnf139Q7TMV1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf139Q7TMV1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf139Q7TMV1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf139Q7TMV1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Rnf139Q7TMV1 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.89■□□□□ 0.93
Rnf139Q7TMV1 Gm40848-201ENSMUST00000221998 324 ntBASIC20.89■□□□□ 0.93
Rnf139Q7TMV1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf139Q7TMV1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Rnf139Q7TMV1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf139Q7TMV1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf139Q7TMV1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf139Q7TMV1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf139Q7TMV1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf139Q7TMV1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf139Q7TMV1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.88■□□□□ 0.93
Rnf139Q7TMV1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf139Q7TMV1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf139Q7TMV1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf139Q7TMV1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Rnf139Q7TMV1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf139Q7TMV1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Rnf139Q7TMV1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms