Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn4bQ7M729 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn4bQ7M729 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn4bQ7M729 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.03■□□□□ 0.64
Scn4bQ7M729 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn4bQ7M729 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.03■□□□□ 0.64
Scn4bQ7M729 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Scn4bQ7M729 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn4bQ7M729 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Scn4bQ7M729 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn4bQ7M729 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn4bQ7M729 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn4bQ7M729 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn4bQ7M729 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Scn4bQ7M729 AA386476-201ENSMUST00000098781 1665 ntBASIC19.01■□□□□ 0.63
Scn4bQ7M729 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Scn4bQ7M729 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn4bQ7M729 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.01■□□□□ 0.63
Scn4bQ7M729 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn4bQ7M729 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.01■□□□□ 0.63
Scn4bQ7M729 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.01■□□□□ 0.63
Scn4bQ7M729 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn4bQ7M729 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn4bQ7M729 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Scn4bQ7M729 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn4bQ7M729 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Scn4bQ7M729 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Scn4bQ7M729 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn4bQ7M729 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn4bQ7M729 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn4bQ7M729 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn4bQ7M729 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn4bQ7M729 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn4bQ7M729 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19■□□□□ 0.63
Scn4bQ7M729 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19■□□□□ 0.63
Scn4bQ7M729 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Scn4bQ7M729 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn4bQ7M729 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn4bQ7M729 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19■□□□□ 0.63
Scn4bQ7M729 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19■□□□□ 0.63
Scn4bQ7M729 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Scn4bQ7M729 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.99■□□□□ 0.63
Scn4bQ7M729 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn4bQ7M729 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn4bQ7M729 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Scn4bQ7M729 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn4bQ7M729 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scn4bQ7M729 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Scn4bQ7M729 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.99■□□□□ 0.63
Scn4bQ7M729 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Scn4bQ7M729 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.99■□□□□ 0.63
Scn4bQ7M729 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scn4bQ7M729 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scn4bQ7M729 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn4bQ7M729 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.98■□□□□ 0.63
Scn4bQ7M729 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn4bQ7M729 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Scn4bQ7M729 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn4bQ7M729 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn4bQ7M729 Gm43137-201ENSMUST00000198052 594 ntBASIC18.98■□□□□ 0.63
Scn4bQ7M729 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Scn4bQ7M729 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Scn4bQ7M729 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn4bQ7M729 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn4bQ7M729 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn4bQ7M729 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.97■□□□□ 0.63
Scn4bQ7M729 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Scn4bQ7M729 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn4bQ7M729 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.97■□□□□ 0.63
Scn4bQ7M729 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Scn4bQ7M729 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn4bQ7M729 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn4bQ7M729 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn4bQ7M729 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn4bQ7M729 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn4bQ7M729 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn4bQ7M729 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Scn4bQ7M729 Gm12821-201ENSMUST00000120022 600 ntBASIC18.96■□□□□ 0.63
Scn4bQ7M729 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Scn4bQ7M729 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scn4bQ7M729 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn4bQ7M729 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn4bQ7M729 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.96■□□□□ 0.63
Scn4bQ7M729 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn4bQ7M729 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scn4bQ7M729 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Scn4bQ7M729 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn4bQ7M729 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Scn4bQ7M729 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn4bQ7M729 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn4bQ7M729 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn4bQ7M729 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Scn4bQ7M729 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scn4bQ7M729 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
Scn4bQ7M729 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn4bQ7M729 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn4bQ7M729 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn4bQ7M729 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn4bQ7M729 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn4bQ7M729 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms