Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Kdm1aQ6ZQ88 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Kdm1aQ6ZQ88 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.6■■□□□ 1.05
Kdm1aQ6ZQ88 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Kdm1aQ6ZQ88 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Kdm1aQ6ZQ88 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.6■■□□□ 1.05
Kdm1aQ6ZQ88 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Kdm1aQ6ZQ88 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Kdm1aQ6ZQ88 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
Kdm1aQ6ZQ88 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.59■■□□□ 1.05
Kdm1aQ6ZQ88 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.59■■□□□ 1.05
Kdm1aQ6ZQ88 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Kdm1aQ6ZQ88 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Kdm1aQ6ZQ88 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Kdm1aQ6ZQ88 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Kdm1aQ6ZQ88 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.58■■□□□ 1.05
Kdm1aQ6ZQ88 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.58■■□□□ 1.05
Kdm1aQ6ZQ88 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Kdm1aQ6ZQ88 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.58■■□□□ 1.05
Kdm1aQ6ZQ88 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Kdm1aQ6ZQ88 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Kdm1aQ6ZQ88 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.58■■□□□ 1.04
Kdm1aQ6ZQ88 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Kdm1aQ6ZQ88 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Kdm1aQ6ZQ88 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Kdm1aQ6ZQ88 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Kdm1aQ6ZQ88 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Kdm1aQ6ZQ88 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Kdm1aQ6ZQ88 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.57■■□□□ 1.04
Kdm1aQ6ZQ88 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.57■■□□□ 1.04
Kdm1aQ6ZQ88 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
Kdm1aQ6ZQ88 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Kdm1aQ6ZQ88 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Kdm1aQ6ZQ88 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Kdm1aQ6ZQ88 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Kdm1aQ6ZQ88 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Kdm1aQ6ZQ88 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Kdm1aQ6ZQ88 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Kdm1aQ6ZQ88 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.56■■□□□ 1.04
Kdm1aQ6ZQ88 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.55■■□□□ 1.04
Kdm1aQ6ZQ88 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Kdm1aQ6ZQ88 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.55■■□□□ 1.04
Kdm1aQ6ZQ88 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Kdm1aQ6ZQ88 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Kdm1aQ6ZQ88 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Kdm1aQ6ZQ88 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Kdm1aQ6ZQ88 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Kdm1aQ6ZQ88 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.54■■□□□ 1.04
Kdm1aQ6ZQ88 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
Kdm1aQ6ZQ88 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.54■■□□□ 1.04
Kdm1aQ6ZQ88 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Kdm1aQ6ZQ88 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Kdm1aQ6ZQ88 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Kdm1aQ6ZQ88 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Kdm1aQ6ZQ88 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Kdm1aQ6ZQ88 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Kdm1aQ6ZQ88 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
Kdm1aQ6ZQ88 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Kdm1aQ6ZQ88 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Kdm1aQ6ZQ88 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Kdm1aQ6ZQ88 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
Kdm1aQ6ZQ88 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.53■■□□□ 1.04
Kdm1aQ6ZQ88 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Kdm1aQ6ZQ88 Gm9847-201ENSMUST00000052528 599 ntBASIC21.53■■□□□ 1.04
Kdm1aQ6ZQ88 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Kdm1aQ6ZQ88 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Kdm1aQ6ZQ88 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Kdm1aQ6ZQ88 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Kdm1aQ6ZQ88 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Kdm1aQ6ZQ88 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Kdm1aQ6ZQ88 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Kdm1aQ6ZQ88 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Kdm1aQ6ZQ88 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Kdm1aQ6ZQ88 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Kdm1aQ6ZQ88 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.51■■□□□ 1.03
Kdm1aQ6ZQ88 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Kdm1aQ6ZQ88 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Kdm1aQ6ZQ88 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Kdm1aQ6ZQ88 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Kdm1aQ6ZQ88 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Kdm1aQ6ZQ88 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Kdm1aQ6ZQ88 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Kdm1aQ6ZQ88 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Kdm1aQ6ZQ88 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Kdm1aQ6ZQ88 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Kdm1aQ6ZQ88 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
Kdm1aQ6ZQ88 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Kdm1aQ6ZQ88 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Kdm1aQ6ZQ88 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Kdm1aQ6ZQ88 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Kdm1aQ6ZQ88 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Kdm1aQ6ZQ88 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Kdm1aQ6ZQ88 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Kdm1aQ6ZQ88 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Kdm1aQ6ZQ88 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Kdm1aQ6ZQ88 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Kdm1aQ6ZQ88 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.5■■□□□ 1.03
Kdm1aQ6ZQ88 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Kdm1aQ6ZQ88 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.5■■□□□ 1.03
Kdm1aQ6ZQ88 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms