Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Scn10aQ6QIY3 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Scn10aQ6QIY3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Scn10aQ6QIY3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Scn10aQ6QIY3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Scn10aQ6QIY3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Scn10aQ6QIY3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Scn10aQ6QIY3 Gm13181-201ENSMUST00000120117 1069 ntBASIC22.59■■□□□ 1.21
Scn10aQ6QIY3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Scn10aQ6QIY3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Scn10aQ6QIY3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Scn10aQ6QIY3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Scn10aQ6QIY3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Scn10aQ6QIY3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Scn10aQ6QIY3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Scn10aQ6QIY3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Scn10aQ6QIY3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Scn10aQ6QIY3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Scn10aQ6QIY3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Scn10aQ6QIY3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC22.58■■□□□ 1.21
Scn10aQ6QIY3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC22.58■■□□□ 1.21
Scn10aQ6QIY3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Scn10aQ6QIY3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC22.58■■□□□ 1.21
Scn10aQ6QIY3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Scn10aQ6QIY3 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.57■■□□□ 1.2
Scn10aQ6QIY3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC22.57■■□□□ 1.2
Scn10aQ6QIY3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC22.57■■□□□ 1.2
Scn10aQ6QIY3 Rab3c-203ENSMUST00000224180 967 ntBASIC22.57■■□□□ 1.2
Scn10aQ6QIY3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scn10aQ6QIY3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Scn10aQ6QIY3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Scn10aQ6QIY3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Scn10aQ6QIY3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scn10aQ6QIY3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC22.56■■□□□ 1.2
Scn10aQ6QIY3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC22.56■■□□□ 1.2
Scn10aQ6QIY3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Scn10aQ6QIY3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Scn10aQ6QIY3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC22.56■■□□□ 1.2
Scn10aQ6QIY3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.56■■□□□ 1.2
Scn10aQ6QIY3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Scn10aQ6QIY3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
Scn10aQ6QIY3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Scn10aQ6QIY3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Scn10aQ6QIY3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Scn10aQ6QIY3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Scn10aQ6QIY3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Scn10aQ6QIY3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Scn10aQ6QIY3 Gm27275-201ENSMUST00000184318 272 ntBASIC22.55■■□□□ 1.2
Scn10aQ6QIY3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Scn10aQ6QIY3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Scn10aQ6QIY3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Scn10aQ6QIY3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scn10aQ6QIY3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scn10aQ6QIY3 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Scn10aQ6QIY3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Scn10aQ6QIY3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scn10aQ6QIY3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scn10aQ6QIY3 Gm37563-201ENSMUST00000192580 1513 ntBASIC22.54■■□□□ 1.2
Scn10aQ6QIY3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scn10aQ6QIY3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Scn10aQ6QIY3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scn10aQ6QIY3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC22.54■■□□□ 1.2
Scn10aQ6QIY3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scn10aQ6QIY3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scn10aQ6QIY3 Gm43909-201ENSMUST00000203443 1876 ntBASIC22.53■■□□□ 1.2
Scn10aQ6QIY3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scn10aQ6QIY3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
Scn10aQ6QIY3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scn10aQ6QIY3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scn10aQ6QIY3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scn10aQ6QIY3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scn10aQ6QIY3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scn10aQ6QIY3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scn10aQ6QIY3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.53■■□□□ 1.2
Scn10aQ6QIY3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC22.53■■□□□ 1.2
Scn10aQ6QIY3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scn10aQ6QIY3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scn10aQ6QIY3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Scn10aQ6QIY3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Scn10aQ6QIY3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Scn10aQ6QIY3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Scn10aQ6QIY3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Scn10aQ6QIY3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Scn10aQ6QIY3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
Scn10aQ6QIY3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Scn10aQ6QIY3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Scn10aQ6QIY3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Scn10aQ6QIY3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Scn10aQ6QIY3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Scn10aQ6QIY3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Scn10aQ6QIY3 Gm44672-201ENSMUST00000206944 1098 ntBASIC22.5■■□□□ 1.19
Scn10aQ6QIY3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC22.5■■□□□ 1.19
Scn10aQ6QIY3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Scn10aQ6QIY3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Scn10aQ6QIY3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Scn10aQ6QIY3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Scn10aQ6QIY3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Scn10aQ6QIY3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Scn10aQ6QIY3 Gm7860-201ENSMUST00000121190 879 ntBASIC22.49■■□□□ 1.19
Scn10aQ6QIY3 Gm22325-201ENSMUST00000158904 308 ntBASIC22.49■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms