Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarca1Q6PGB8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarca1Q6PGB8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.79■■□□□ 1.08
Smarca1Q6PGB8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarca1Q6PGB8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarca1Q6PGB8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarca1Q6PGB8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Smarca1Q6PGB8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarca1Q6PGB8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.78■■□□□ 1.08
Smarca1Q6PGB8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.78■■□□□ 1.08
Smarca1Q6PGB8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarca1Q6PGB8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarca1Q6PGB8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Smarca1Q6PGB8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Smarca1Q6PGB8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarca1Q6PGB8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Smarca1Q6PGB8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Smarca1Q6PGB8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarca1Q6PGB8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.77■■□□□ 1.08
Smarca1Q6PGB8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.77■■□□□ 1.08
Smarca1Q6PGB8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarca1Q6PGB8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.77■■□□□ 1.08
Smarca1Q6PGB8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Smarca1Q6PGB8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Smarca1Q6PGB8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarca1Q6PGB8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Smarca1Q6PGB8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Smarca1Q6PGB8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarca1Q6PGB8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarca1Q6PGB8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Smarca1Q6PGB8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarca1Q6PGB8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Smarca1Q6PGB8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarca1Q6PGB8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Smarca1Q6PGB8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.75■■□□□ 1.07
Smarca1Q6PGB8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.75■■□□□ 1.07
Smarca1Q6PGB8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.75■■□□□ 1.07
Smarca1Q6PGB8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarca1Q6PGB8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.75■■□□□ 1.07
Smarca1Q6PGB8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarca1Q6PGB8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca1Q6PGB8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca1Q6PGB8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca1Q6PGB8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca1Q6PGB8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
Smarca1Q6PGB8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca1Q6PGB8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.74■■□□□ 1.07
Smarca1Q6PGB8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca1Q6PGB8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca1Q6PGB8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca1Q6PGB8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Smarca1Q6PGB8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca1Q6PGB8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca1Q6PGB8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarca1Q6PGB8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarca1Q6PGB8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarca1Q6PGB8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Smarca1Q6PGB8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarca1Q6PGB8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarca1Q6PGB8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarca1Q6PGB8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Smarca1Q6PGB8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarca1Q6PGB8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarca1Q6PGB8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
Smarca1Q6PGB8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarca1Q6PGB8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarca1Q6PGB8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarca1Q6PGB8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarca1Q6PGB8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarca1Q6PGB8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarca1Q6PGB8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
Smarca1Q6PGB8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarca1Q6PGB8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarca1Q6PGB8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarca1Q6PGB8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Smarca1Q6PGB8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarca1Q6PGB8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Smarca1Q6PGB8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarca1Q6PGB8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarca1Q6PGB8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarca1Q6PGB8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.71■■□□□ 1.07
Smarca1Q6PGB8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarca1Q6PGB8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarca1Q6PGB8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Smarca1Q6PGB8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.7■■□□□ 1.06
Smarca1Q6PGB8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarca1Q6PGB8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smarca1Q6PGB8 Gm26833-201ENSMUST00000180899 440 ntBASIC21.7■■□□□ 1.06
Smarca1Q6PGB8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarca1Q6PGB8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarca1Q6PGB8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smarca1Q6PGB8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
Smarca1Q6PGB8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarca1Q6PGB8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Smarca1Q6PGB8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarca1Q6PGB8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarca1Q6PGB8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
Smarca1Q6PGB8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Smarca1Q6PGB8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarca1Q6PGB8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms