Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim45Q6PFY8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim45Q6PFY8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim45Q6PFY8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim45Q6PFY8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim45Q6PFY8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim45Q6PFY8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim45Q6PFY8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim45Q6PFY8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trim45Q6PFY8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Trim45Q6PFY8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim45Q6PFY8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.41■□□□□ 0.54
Trim45Q6PFY8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.41■□□□□ 0.54
Trim45Q6PFY8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim45Q6PFY8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim45Q6PFY8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim45Q6PFY8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim45Q6PFY8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim45Q6PFY8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim45Q6PFY8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim45Q6PFY8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim45Q6PFY8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim45Q6PFY8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
Trim45Q6PFY8 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Trim45Q6PFY8 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.4■□□□□ 0.54
Trim45Q6PFY8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim45Q6PFY8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim45Q6PFY8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim45Q6PFY8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim45Q6PFY8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim45Q6PFY8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim45Q6PFY8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.39■□□□□ 0.54
Trim45Q6PFY8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim45Q6PFY8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim45Q6PFY8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim45Q6PFY8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim45Q6PFY8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim45Q6PFY8 Gm43173-201ENSMUST00000202246 593 ntBASIC18.39■□□□□ 0.53
Trim45Q6PFY8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.39■□□□□ 0.53
Trim45Q6PFY8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim45Q6PFY8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.39■□□□□ 0.53
Trim45Q6PFY8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trim45Q6PFY8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim45Q6PFY8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim45Q6PFY8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim45Q6PFY8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim45Q6PFY8 Gm12251-201ENSMUST00000117893 792 ntBASIC18.38■□□□□ 0.53
Trim45Q6PFY8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.38■□□□□ 0.53
Trim45Q6PFY8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim45Q6PFY8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trim45Q6PFY8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Trim45Q6PFY8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim45Q6PFY8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim45Q6PFY8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim45Q6PFY8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim45Q6PFY8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trim45Q6PFY8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim45Q6PFY8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim45Q6PFY8 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.37■□□□□ 0.53
Trim45Q6PFY8 Spcs1-204ENSMUST00000226782 949 ntBASIC18.37■□□□□ 0.53
Trim45Q6PFY8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim45Q6PFY8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim45Q6PFY8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.37■□□□□ 0.53
Trim45Q6PFY8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim45Q6PFY8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim45Q6PFY8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim45Q6PFY8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.36■□□□□ 0.53
Trim45Q6PFY8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim45Q6PFY8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim45Q6PFY8 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.36■□□□□ 0.53
Trim45Q6PFY8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim45Q6PFY8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim45Q6PFY8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim45Q6PFY8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim45Q6PFY8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim45Q6PFY8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim45Q6PFY8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim45Q6PFY8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim45Q6PFY8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.35■□□□□ 0.53
Trim45Q6PFY8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim45Q6PFY8 Gm43017-201ENSMUST00000198296 752 ntBASIC18.35■□□□□ 0.53
Trim45Q6PFY8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim45Q6PFY8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim45Q6PFY8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trim45Q6PFY8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim45Q6PFY8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim45Q6PFY8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim45Q6PFY8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim45Q6PFY8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trim45Q6PFY8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim45Q6PFY8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trim45Q6PFY8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
Trim45Q6PFY8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim45Q6PFY8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim45Q6PFY8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim45Q6PFY8 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim45Q6PFY8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim45Q6PFY8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim45Q6PFY8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim45Q6PFY8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms