Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Nup98Q6PFD9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Nup98Q6PFD9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Nup98Q6PFD9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Nup98Q6PFD9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Nup98Q6PFD9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
Nup98Q6PFD9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Nup98Q6PFD9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
Nup98Q6PFD9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Nup98Q6PFD9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Nup98Q6PFD9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC23.42■■□□□ 1.34
Nup98Q6PFD9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Nup98Q6PFD9 Gm12669-201ENSMUST00000122162 1009 ntBASIC23.42■■□□□ 1.34
Nup98Q6PFD9 Spcs1-207ENSMUST00000228767 1008 ntBASIC23.42■■□□□ 1.34
Nup98Q6PFD9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Nup98Q6PFD9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Nup98Q6PFD9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
Nup98Q6PFD9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC23.41■■□□□ 1.34
Nup98Q6PFD9 Gm43859-201ENSMUST00000200075 1412 ntBASIC23.41■■□□□ 1.34
Nup98Q6PFD9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Nup98Q6PFD9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC23.41■■□□□ 1.34
Nup98Q6PFD9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Nup98Q6PFD9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Nup98Q6PFD9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Nup98Q6PFD9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Nup98Q6PFD9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Nup98Q6PFD9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Nup98Q6PFD9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Nup98Q6PFD9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Nup98Q6PFD9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC23.39■■□□□ 1.33
Nup98Q6PFD9 Gm42555-201ENSMUST00000199304 1039 ntBASIC23.39■■□□□ 1.33
Nup98Q6PFD9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Nup98Q6PFD9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC23.39■■□□□ 1.33
Nup98Q6PFD9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
Nup98Q6PFD9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
Nup98Q6PFD9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Nup98Q6PFD9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Nup98Q6PFD9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Nup98Q6PFD9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Nup98Q6PFD9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Nup98Q6PFD9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Nup98Q6PFD9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Nup98Q6PFD9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Nup98Q6PFD9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Nup98Q6PFD9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Nup98Q6PFD9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Nup98Q6PFD9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Nup98Q6PFD9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Nup98Q6PFD9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Nup98Q6PFD9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Nup98Q6PFD9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Nup98Q6PFD9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Nup98Q6PFD9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Nup98Q6PFD9 Gm13534-201ENSMUST00000121169 513 ntBASIC23.36■■□□□ 1.33
Nup98Q6PFD9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Nup98Q6PFD9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC23.36■■□□□ 1.33
Nup98Q6PFD9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Nup98Q6PFD9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Nup98Q6PFD9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Nup98Q6PFD9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Nup98Q6PFD9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Nup98Q6PFD9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nup98Q6PFD9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Nup98Q6PFD9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Nup98Q6PFD9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Nup98Q6PFD9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Nup98Q6PFD9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC23.33■■□□□ 1.33
Nup98Q6PFD9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Nup98Q6PFD9 Gm10655-201ENSMUST00000098658 1397 ntBASIC23.33■■□□□ 1.33
Nup98Q6PFD9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Nup98Q6PFD9 Gm43006-201ENSMUST00000197702 1602 ntBASIC23.33■■□□□ 1.33
Nup98Q6PFD9 Mir5133-201ENSMUST00000174955 77 ntBASIC23.33■■□□□ 1.32
Nup98Q6PFD9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC23.33■■□□□ 1.32
Nup98Q6PFD9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Nup98Q6PFD9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
Nup98Q6PFD9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Nup98Q6PFD9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Nup98Q6PFD9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Nup98Q6PFD9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Nup98Q6PFD9 Gm6420-201ENSMUST00000193885 723 ntBASIC23.32■■□□□ 1.32
Nup98Q6PFD9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC23.32■■□□□ 1.32
Nup98Q6PFD9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
Nup98Q6PFD9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Nup98Q6PFD9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Nup98Q6PFD9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nup98Q6PFD9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Nup98Q6PFD9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Nup98Q6PFD9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC23.31■■□□□ 1.32
Nup98Q6PFD9 Gm12441-201ENSMUST00000121806 588 ntBASIC23.31■■□□□ 1.32
Nup98Q6PFD9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nup98Q6PFD9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC23.31■■□□□ 1.32
Nup98Q6PFD9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nup98Q6PFD9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nup98Q6PFD9 Gm6211-202ENSMUST00000167849 925 ntBASIC23.31■■□□□ 1.32
Nup98Q6PFD9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC23.31■■□□□ 1.32
Nup98Q6PFD9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC23.31■■□□□ 1.32
Nup98Q6PFD9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nup98Q6PFD9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.32
Nup98Q6PFD9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Nup98Q6PFD9 Gm26524-201ENSMUST00000192339 390 ntBASIC23.3■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms