Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf6Q6NVF9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf6Q6NVF9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf6Q6NVF9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf6Q6NVF9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.91■□□□□ 0.62
Cpsf6Q6NVF9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf6Q6NVF9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Cpsf6Q6NVF9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf6Q6NVF9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Cpsf6Q6NVF9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cpsf6Q6NVF9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Cpsf6Q6NVF9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpsf6Q6NVF9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.9■□□□□ 0.62
Cpsf6Q6NVF9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cpsf6Q6NVF9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cpsf6Q6NVF9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cpsf6Q6NVF9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.9■□□□□ 0.62
Cpsf6Q6NVF9 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.9■□□□□ 0.62
Cpsf6Q6NVF9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpsf6Q6NVF9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Cpsf6Q6NVF9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf6Q6NVF9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf6Q6NVF9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.89■□□□□ 0.61
Cpsf6Q6NVF9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf6Q6NVF9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf6Q6NVF9 Gm9847-201ENSMUST00000052528 599 ntBASIC18.89■□□□□ 0.61
Cpsf6Q6NVF9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf6Q6NVF9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf6Q6NVF9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf6Q6NVF9 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.88■□□□□ 0.61
Cpsf6Q6NVF9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf6Q6NVF9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf6Q6NVF9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf6Q6NVF9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf6Q6NVF9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.88■□□□□ 0.61
Cpsf6Q6NVF9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf6Q6NVF9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf6Q6NVF9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf6Q6NVF9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.87■□□□□ 0.61
Cpsf6Q6NVF9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf6Q6NVF9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf6Q6NVF9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.87■□□□□ 0.61
Cpsf6Q6NVF9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf6Q6NVF9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
Cpsf6Q6NVF9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf6Q6NVF9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf6Q6NVF9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf6Q6NVF9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf6Q6NVF9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf6Q6NVF9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf6Q6NVF9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.86■□□□□ 0.61
Cpsf6Q6NVF9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Cpsf6Q6NVF9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Cpsf6Q6NVF9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf6Q6NVF9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf6Q6NVF9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf6Q6NVF9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.86■□□□□ 0.61
Cpsf6Q6NVF9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf6Q6NVF9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf6Q6NVF9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Cpsf6Q6NVF9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf6Q6NVF9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.85■□□□□ 0.61
Cpsf6Q6NVF9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf6Q6NVF9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf6Q6NVF9 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.85■□□□□ 0.61
Cpsf6Q6NVF9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf6Q6NVF9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf6Q6NVF9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf6Q6NVF9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf6Q6NVF9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.84■□□□□ 0.61
Cpsf6Q6NVF9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf6Q6NVF9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf6Q6NVF9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf6Q6NVF9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf6Q6NVF9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.84■□□□□ 0.61
Cpsf6Q6NVF9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.84■□□□□ 0.61
Cpsf6Q6NVF9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cpsf6Q6NVF9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cpsf6Q6NVF9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Cpsf6Q6NVF9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cpsf6Q6NVF9 AA386476-201ENSMUST00000098781 1665 ntBASIC18.83■□□□□ 0.61
Cpsf6Q6NVF9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf6Q6NVF9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Cpsf6Q6NVF9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf6Q6NVF9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.83■□□□□ 0.6
Cpsf6Q6NVF9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf6Q6NVF9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf6Q6NVF9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf6Q6NVF9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf6Q6NVF9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf6Q6NVF9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.83■□□□□ 0.6
Cpsf6Q6NVF9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf6Q6NVF9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf6Q6NVF9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cpsf6Q6NVF9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf6Q6NVF9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf6Q6NVF9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf6Q6NVF9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cpsf6Q6NVF9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf6Q6NVF9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms