Protein–RNA interactions for Protein: Q6EBV9

Atg9b, Autophagy-related protein 9B, mousemouse

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg9bQ6EBV9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Atg9bQ6EBV9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atg9bQ6EBV9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atg9bQ6EBV9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Atg9bQ6EBV9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atg9bQ6EBV9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Atg9bQ6EBV9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atg9bQ6EBV9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.69■□□□□ 0.9
Atg9bQ6EBV9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.69■□□□□ 0.9
Atg9bQ6EBV9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Atg9bQ6EBV9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Atg9bQ6EBV9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atg9bQ6EBV9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atg9bQ6EBV9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Atg9bQ6EBV9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atg9bQ6EBV9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atg9bQ6EBV9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atg9bQ6EBV9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atg9bQ6EBV9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.68■□□□□ 0.9
Atg9bQ6EBV9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Atg9bQ6EBV9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atg9bQ6EBV9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atg9bQ6EBV9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Atg9bQ6EBV9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atg9bQ6EBV9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Atg9bQ6EBV9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atg9bQ6EBV9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atg9bQ6EBV9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Atg9bQ6EBV9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atg9bQ6EBV9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Atg9bQ6EBV9 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.67■□□□□ 0.9
Atg9bQ6EBV9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atg9bQ6EBV9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Atg9bQ6EBV9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.67■□□□□ 0.9
Atg9bQ6EBV9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atg9bQ6EBV9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.67■□□□□ 0.9
Atg9bQ6EBV9 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.67■□□□□ 0.9
Atg9bQ6EBV9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atg9bQ6EBV9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atg9bQ6EBV9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atg9bQ6EBV9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Atg9bQ6EBV9 Gm11421-201ENSMUST00000122124 294 ntBASIC20.66■□□□□ 0.9
Atg9bQ6EBV9 Gm26833-201ENSMUST00000180899 440 ntBASIC20.66■□□□□ 0.9
Atg9bQ6EBV9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Atg9bQ6EBV9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Atg9bQ6EBV9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atg9bQ6EBV9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.65■□□□□ 0.9
Atg9bQ6EBV9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atg9bQ6EBV9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atg9bQ6EBV9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Atg9bQ6EBV9 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.64■□□□□ 0.9
Atg9bQ6EBV9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.64■□□□□ 0.89
Atg9bQ6EBV9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.64■□□□□ 0.89
Atg9bQ6EBV9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Atg9bQ6EBV9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.64■□□□□ 0.89
Atg9bQ6EBV9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atg9bQ6EBV9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Atg9bQ6EBV9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Atg9bQ6EBV9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Atg9bQ6EBV9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Atg9bQ6EBV9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
Atg9bQ6EBV9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atg9bQ6EBV9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Atg9bQ6EBV9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atg9bQ6EBV9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atg9bQ6EBV9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atg9bQ6EBV9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atg9bQ6EBV9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atg9bQ6EBV9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Atg9bQ6EBV9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atg9bQ6EBV9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Atg9bQ6EBV9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atg9bQ6EBV9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atg9bQ6EBV9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atg9bQ6EBV9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.61■□□□□ 0.89
Atg9bQ6EBV9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
Atg9bQ6EBV9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atg9bQ6EBV9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atg9bQ6EBV9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Atg9bQ6EBV9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atg9bQ6EBV9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atg9bQ6EBV9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Atg9bQ6EBV9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atg9bQ6EBV9 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.6■□□□□ 0.89
Atg9bQ6EBV9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.6■□□□□ 0.89
Atg9bQ6EBV9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Atg9bQ6EBV9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atg9bQ6EBV9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atg9bQ6EBV9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atg9bQ6EBV9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atg9bQ6EBV9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atg9bQ6EBV9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Atg9bQ6EBV9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atg9bQ6EBV9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atg9bQ6EBV9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.59■□□□□ 0.89
Atg9bQ6EBV9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atg9bQ6EBV9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.59■□□□□ 0.89
Atg9bQ6EBV9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atg9bQ6EBV9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Atg9bQ6EBV9 Gm40848-201ENSMUST00000221998 324 ntBASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms