Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ltn1Q6A009 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Ltn1Q6A009 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC23.56■■□□□ 1.36
Ltn1Q6A009 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC23.56■■□□□ 1.36
Ltn1Q6A009 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Ltn1Q6A009 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ltn1Q6A009 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Ltn1Q6A009 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
Ltn1Q6A009 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ltn1Q6A009 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Ltn1Q6A009 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ltn1Q6A009 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ltn1Q6A009 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Ltn1Q6A009 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC23.55■■□□□ 1.36
Ltn1Q6A009 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC23.55■■□□□ 1.36
Ltn1Q6A009 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Ltn1Q6A009 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC23.54■■□□□ 1.36
Ltn1Q6A009 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Ltn1Q6A009 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Ltn1Q6A009 AC154266.1-201ENSMUST00000223190 503 ntBASIC23.54■■□□□ 1.36
Ltn1Q6A009 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ltn1Q6A009 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Ltn1Q6A009 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Ltn1Q6A009 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Ltn1Q6A009 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ltn1Q6A009 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC23.53■■□□□ 1.36
Ltn1Q6A009 Gm13534-201ENSMUST00000121169 513 ntBASIC23.53■■□□□ 1.36
Ltn1Q6A009 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ltn1Q6A009 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ltn1Q6A009 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Ltn1Q6A009 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ltn1Q6A009 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ltn1Q6A009 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ltn1Q6A009 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC23.52■■□□□ 1.36
Ltn1Q6A009 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Ltn1Q6A009 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Ltn1Q6A009 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC23.52■■□□□ 1.36
Ltn1Q6A009 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC23.52■■□□□ 1.35
Ltn1Q6A009 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ltn1Q6A009 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Ltn1Q6A009 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC23.51■■□□□ 1.35
Ltn1Q6A009 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
Ltn1Q6A009 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Ltn1Q6A009 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ltn1Q6A009 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ltn1Q6A009 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ltn1Q6A009 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ltn1Q6A009 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC23.5■■□□□ 1.35
Ltn1Q6A009 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ltn1Q6A009 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC23.5■■□□□ 1.35
Ltn1Q6A009 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Ltn1Q6A009 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC23.5■■□□□ 1.35
Ltn1Q6A009 Gm6365-201ENSMUST00000054711 744 ntBASIC23.5■■□□□ 1.35
Ltn1Q6A009 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ltn1Q6A009 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ltn1Q6A009 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ltn1Q6A009 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ltn1Q6A009 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC23.49■■□□□ 1.35
Ltn1Q6A009 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
Ltn1Q6A009 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Ltn1Q6A009 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ltn1Q6A009 Gm13168-201ENSMUST00000121771 632 ntBASIC23.48■■□□□ 1.35
Ltn1Q6A009 Gm10252-201ENSMUST00000209541 832 ntBASIC23.48■■□□□ 1.35
Ltn1Q6A009 Gm20049-201ENSMUST00000219950 730 ntBASIC23.48■■□□□ 1.35
Ltn1Q6A009 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
Ltn1Q6A009 Snhg20-203ENSMUST00000182811 2153 ntBASIC23.48■■□□□ 1.35
Ltn1Q6A009 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ltn1Q6A009 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Ltn1Q6A009 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Ltn1Q6A009 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC23.47■■□□□ 1.35
Ltn1Q6A009 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ltn1Q6A009 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ltn1Q6A009 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ltn1Q6A009 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ltn1Q6A009 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Ltn1Q6A009 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Ltn1Q6A009 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ltn1Q6A009 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ltn1Q6A009 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ltn1Q6A009 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ltn1Q6A009 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ltn1Q6A009 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ltn1Q6A009 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC23.46■■□□□ 1.35
Ltn1Q6A009 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Ltn1Q6A009 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Ltn1Q6A009 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC23.46■■□□□ 1.35
Ltn1Q6A009 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ltn1Q6A009 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ltn1Q6A009 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ltn1Q6A009 Gm3807-201ENSMUST00000193520 1168 ntBASIC23.45■■□□□ 1.34
Ltn1Q6A009 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC23.45■■□□□ 1.34
Ltn1Q6A009 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ltn1Q6A009 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ltn1Q6A009 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ltn1Q6A009 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Ltn1Q6A009 Gm37856-201ENSMUST00000191634 999 ntBASIC23.45■■□□□ 1.34
Ltn1Q6A009 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC23.45■■□□□ 1.34
Ltn1Q6A009 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ltn1Q6A009 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ltn1Q6A009 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms