Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AtmQ62388 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AtmQ62388 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.78■□□□□ 0.6
AtmQ62388 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AtmQ62388 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.77■□□□□ 0.6
AtmQ62388 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AtmQ62388 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AtmQ62388 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AtmQ62388 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AtmQ62388 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.77■□□□□ 0.6
AtmQ62388 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AtmQ62388 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AtmQ62388 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.77■□□□□ 0.6
AtmQ62388 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AtmQ62388 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
AtmQ62388 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.77■□□□□ 0.59
AtmQ62388 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.77■□□□□ 0.59
AtmQ62388 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.77■□□□□ 0.59
AtmQ62388 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
AtmQ62388 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
AtmQ62388 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AtmQ62388 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AtmQ62388 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AtmQ62388 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.76■□□□□ 0.59
AtmQ62388 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
AtmQ62388 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
AtmQ62388 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AtmQ62388 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.76■□□□□ 0.59
AtmQ62388 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
AtmQ62388 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AtmQ62388 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AtmQ62388 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.75■□□□□ 0.59
AtmQ62388 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
AtmQ62388 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
AtmQ62388 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AtmQ62388 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AtmQ62388 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
AtmQ62388 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
AtmQ62388 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AtmQ62388 Gm5643-201ENSMUST00000117081 966 ntBASIC18.75■□□□□ 0.59
AtmQ62388 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
AtmQ62388 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AtmQ62388 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.75■□□□□ 0.59
AtmQ62388 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AtmQ62388 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AtmQ62388 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AtmQ62388 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
AtmQ62388 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AtmQ62388 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AtmQ62388 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.74■□□□□ 0.59
AtmQ62388 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AtmQ62388 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
AtmQ62388 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AtmQ62388 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AtmQ62388 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
AtmQ62388 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
AtmQ62388 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.74■□□□□ 0.59
AtmQ62388 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AtmQ62388 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
AtmQ62388 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AtmQ62388 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AtmQ62388 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.73■□□□□ 0.59
AtmQ62388 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.73■□□□□ 0.59
AtmQ62388 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AtmQ62388 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AtmQ62388 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
AtmQ62388 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AtmQ62388 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AtmQ62388 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AtmQ62388 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AtmQ62388 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
AtmQ62388 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
AtmQ62388 Gm13146-201ENSMUST00000118508 780 ntBASIC18.72■□□□□ 0.59
AtmQ62388 Gm13534-201ENSMUST00000121169 513 ntBASIC18.72■□□□□ 0.59
AtmQ62388 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AtmQ62388 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
AtmQ62388 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AtmQ62388 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
AtmQ62388 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
AtmQ62388 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.72■□□□□ 0.59
AtmQ62388 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
AtmQ62388 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.71■□□□□ 0.59
AtmQ62388 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.71■□□□□ 0.59
AtmQ62388 Gm6576-201ENSMUST00000169678 883 ntBASIC18.71■□□□□ 0.59
AtmQ62388 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
AtmQ62388 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.71■□□□□ 0.59
AtmQ62388 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
AtmQ62388 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AtmQ62388 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
AtmQ62388 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AtmQ62388 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
AtmQ62388 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.7■□□□□ 0.58
AtmQ62388 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AtmQ62388 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AtmQ62388 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.7■□□□□ 0.58
AtmQ62388 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AtmQ62388 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
AtmQ62388 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
AtmQ62388 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AtmQ62388 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms