Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Six3Q62233 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Six3Q62233 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Six3Q62233 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.08■□□□□ 0.64
Six3Q62233 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Six3Q62233 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Six3Q62233 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Six3Q62233 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.08■□□□□ 0.64
Six3Q62233 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Six3Q62233 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Six3Q62233 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Six3Q62233 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six3Q62233 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Six3Q62233 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Six3Q62233 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Six3Q62233 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six3Q62233 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Six3Q62233 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Six3Q62233 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six3Q62233 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six3Q62233 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Six3Q62233 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Six3Q62233 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six3Q62233 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Six3Q62233 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Six3Q62233 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Six3Q62233 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Six3Q62233 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Six3Q62233 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.06■□□□□ 0.64
Six3Q62233 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Six3Q62233 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Six3Q62233 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Six3Q62233 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Six3Q62233 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six3Q62233 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Six3Q62233 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six3Q62233 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Six3Q62233 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six3Q62233 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.05■□□□□ 0.64
Six3Q62233 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.05■□□□□ 0.64
Six3Q62233 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six3Q62233 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six3Q62233 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Six3Q62233 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six3Q62233 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Six3Q62233 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.05■□□□□ 0.64
Six3Q62233 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.05■□□□□ 0.64
Six3Q62233 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six3Q62233 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six3Q62233 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six3Q62233 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Six3Q62233 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.04■□□□□ 0.64
Six3Q62233 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.04■□□□□ 0.64
Six3Q62233 Golgb1-201ENSMUST00000023534 498 ntBASIC19.04■□□□□ 0.64
Six3Q62233 AA386476-201ENSMUST00000098781 1665 ntBASIC19.04■□□□□ 0.64
Six3Q62233 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six3Q62233 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six3Q62233 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Six3Q62233 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Six3Q62233 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.03■□□□□ 0.64
Six3Q62233 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six3Q62233 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Six3Q62233 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six3Q62233 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Six3Q62233 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six3Q62233 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six3Q62233 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six3Q62233 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six3Q62233 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six3Q62233 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Six3Q62233 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Six3Q62233 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Six3Q62233 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Six3Q62233 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Six3Q62233 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Six3Q62233 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Six3Q62233 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Six3Q62233 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Six3Q62233 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Six3Q62233 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Six3Q62233 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Six3Q62233 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.01■□□□□ 0.63
Six3Q62233 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.01■□□□□ 0.63
Six3Q62233 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.01■□□□□ 0.63
Six3Q62233 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Six3Q62233 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Six3Q62233 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19■□□□□ 0.63
Six3Q62233 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19■□□□□ 0.63
Six3Q62233 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19■□□□□ 0.63
Six3Q62233 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six3Q62233 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19■□□□□ 0.63
Six3Q62233 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19■□□□□ 0.63
Six3Q62233 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19■□□□□ 0.63
Six3Q62233 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six3Q62233 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Six3Q62233 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Six3Q62233 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Six3Q62233 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Six3Q62233 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Six3Q62233 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms