Protein–RNA interactions for Protein: Q61496

Ddx4, ATP-dependent RNA helicase DDX4, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx4Q61496 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.64■■□□□ 1.05
Ddx4Q61496 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ddx4Q61496 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
Ddx4Q61496 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Ddx4Q61496 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Ddx4Q61496 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.63■■□□□ 1.05
Ddx4Q61496 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Ddx4Q61496 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx4Q61496 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.63■■□□□ 1.05
Ddx4Q61496 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx4Q61496 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx4Q61496 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx4Q61496 Gm6211-202ENSMUST00000167849 925 ntBASIC21.62■■□□□ 1.05
Ddx4Q61496 Gm37856-201ENSMUST00000191634 999 ntBASIC21.62■■□□□ 1.05
Ddx4Q61496 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx4Q61496 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx4Q61496 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Ddx4Q61496 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx4Q61496 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx4Q61496 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx4Q61496 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx4Q61496 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx4Q61496 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ddx4Q61496 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx4Q61496 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx4Q61496 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Ddx4Q61496 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx4Q61496 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx4Q61496 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx4Q61496 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx4Q61496 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx4Q61496 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx4Q61496 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx4Q61496 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx4Q61496 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx4Q61496 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx4Q61496 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx4Q61496 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx4Q61496 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx4Q61496 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.59■■□□□ 1.05
Ddx4Q61496 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.59■■□□□ 1.05
Ddx4Q61496 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx4Q61496 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx4Q61496 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx4Q61496 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx4Q61496 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.58■■□□□ 1.05
Ddx4Q61496 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx4Q61496 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Ddx4Q61496 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.58■■□□□ 1.05
Ddx4Q61496 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.58■■□□□ 1.05
Ddx4Q61496 Mir6982-201ENSMUST00000184354 68 ntBASIC21.58■■□□□ 1.05
Ddx4Q61496 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.58■■□□□ 1.05
Ddx4Q61496 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx4Q61496 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ddx4Q61496 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ddx4Q61496 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ddx4Q61496 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx4Q61496 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx4Q61496 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.57■■□□□ 1.04
Ddx4Q61496 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx4Q61496 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.57■■□□□ 1.04
Ddx4Q61496 Gm7977-201ENSMUST00000193787 748 ntBASIC21.57■■□□□ 1.04
Ddx4Q61496 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.57■■□□□ 1.04
Ddx4Q61496 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx4Q61496 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx4Q61496 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx4Q61496 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx4Q61496 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx4Q61496 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx4Q61496 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx4Q61496 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx4Q61496 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx4Q61496 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx4Q61496 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx4Q61496 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx4Q61496 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx4Q61496 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx4Q61496 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx4Q61496 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.55■■□□□ 1.04
Ddx4Q61496 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx4Q61496 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx4Q61496 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.54■■□□□ 1.04
Ddx4Q61496 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.54■■□□□ 1.04
Ddx4Q61496 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.54■■□□□ 1.04
Ddx4Q61496 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx4Q61496 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx4Q61496 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx4Q61496 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx4Q61496 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx4Q61496 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.53■■□□□ 1.04
Ddx4Q61496 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Ddx4Q61496 Trmt13-210ENSMUST00000198454 880 ntBASIC21.53■■□□□ 1.04
Ddx4Q61496 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.53■■□□□ 1.04
Ddx4Q61496 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx4Q61496 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx4Q61496 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.53■■□□□ 1.04
Ddx4Q61496 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Ddx4Q61496 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx4Q61496 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
Ddx4Q61496 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms