Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a4Q60857 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a4Q60857 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a4Q60857 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a4Q60857 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a4Q60857 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a4Q60857 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc6a4Q60857 Gm10033-202ENSMUST00000211874 928 ntBASIC20.1■□□□□ 0.81
Slc6a4Q60857 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc6a4Q60857 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc6a4Q60857 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Slc6a4Q60857 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Slc6a4Q60857 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slc6a4Q60857 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Slc6a4Q60857 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc6a4Q60857 Gm10849-201ENSMUST00000100397 618 ntBASIC20.09■□□□□ 0.81
Slc6a4Q60857 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slc6a4Q60857 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.09■□□□□ 0.81
Slc6a4Q60857 Gm42569-201ENSMUST00000200539 472 ntBASIC20.09■□□□□ 0.81
Slc6a4Q60857 Gm9988-201ENSMUST00000069786 435 ntBASIC20.09■□□□□ 0.81
Slc6a4Q60857 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc6a4Q60857 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc6a4Q60857 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Slc6a4Q60857 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slc6a4Q60857 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slc6a4Q60857 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a4Q60857 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a4Q60857 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.08■□□□□ 0.81
Slc6a4Q60857 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.08■□□□□ 0.81
Slc6a4Q60857 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.08■□□□□ 0.81
Slc6a4Q60857 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.08■□□□□ 0.81
Slc6a4Q60857 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc6a4Q60857 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc6a4Q60857 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc6a4Q60857 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc6a4Q60857 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc6a4Q60857 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc6a4Q60857 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Slc6a4Q60857 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc6a4Q60857 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a4Q60857 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a4Q60857 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.07■□□□□ 0.8
Slc6a4Q60857 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a4Q60857 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a4Q60857 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.07■□□□□ 0.8
Slc6a4Q60857 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a4Q60857 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a4Q60857 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a4Q60857 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Slc6a4Q60857 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a4Q60857 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a4Q60857 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a4Q60857 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.06■□□□□ 0.8
Slc6a4Q60857 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a4Q60857 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a4Q60857 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.06■□□□□ 0.8
Slc6a4Q60857 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a4Q60857 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a4Q60857 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Slc6a4Q60857 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a4Q60857 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a4Q60857 Reep4-203ENSMUST00000226563 1444 ntBASIC20.05■□□□□ 0.8
Slc6a4Q60857 Gm42778-201ENSMUST00000199644 553 ntBASIC20.05■□□□□ 0.8
Slc6a4Q60857 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.05■□□□□ 0.8
Slc6a4Q60857 Gm18671-201ENSMUST00000214826 683 ntBASIC20.05■□□□□ 0.8
Slc6a4Q60857 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Slc6a4Q60857 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a4Q60857 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a4Q60857 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Slc6a4Q60857 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Slc6a4Q60857 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
Slc6a4Q60857 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
Slc6a4Q60857 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.04■□□□□ 0.8
Slc6a4Q60857 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.04■□□□□ 0.8
Slc6a4Q60857 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a4Q60857 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a4Q60857 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a4Q60857 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a4Q60857 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a4Q60857 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a4Q60857 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Slc6a4Q60857 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a4Q60857 Gm7291-201ENSMUST00000199147 382 ntBASIC20.03■□□□□ 0.8
Slc6a4Q60857 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.03■□□□□ 0.8
Slc6a4Q60857 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Slc6a4Q60857 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a4Q60857 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Slc6a4Q60857 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Slc6a4Q60857 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Slc6a4Q60857 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc6a4Q60857 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc6a4Q60857 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc6a4Q60857 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Slc6a4Q60857 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Slc6a4Q60857 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.02■□□□□ 0.79
Slc6a4Q60857 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a4Q60857 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a4Q60857 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a4Q60857 Gm27405-201ENSMUST00000184201 112 ntBASIC20.01■□□□□ 0.79
Slc6a4Q60857 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms