Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfaip3Q60769 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfaip3Q60769 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfaip3Q60769 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfaip3Q60769 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Tnfaip3Q60769 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfaip3Q60769 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfaip3Q60769 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfaip3Q60769 Gm8495-201ENSMUST00000188740 694 ntBASIC18.37■□□□□ 0.53
Tnfaip3Q60769 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfaip3Q60769 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Tnfaip3Q60769 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfaip3Q60769 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfaip3Q60769 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfaip3Q60769 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfaip3Q60769 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfaip3Q60769 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfaip3Q60769 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfaip3Q60769 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfaip3Q60769 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfaip3Q60769 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfaip3Q60769 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfaip3Q60769 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfaip3Q60769 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfaip3Q60769 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfaip3Q60769 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfaip3Q60769 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfaip3Q60769 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.35■□□□□ 0.53
Tnfaip3Q60769 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfaip3Q60769 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Tnfaip3Q60769 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfaip3Q60769 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.35■□□□□ 0.53
Tnfaip3Q60769 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfaip3Q60769 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfaip3Q60769 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Tnfaip3Q60769 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Tnfaip3Q60769 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.35■□□□□ 0.53
Tnfaip3Q60769 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfaip3Q60769 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.34■□□□□ 0.53
Tnfaip3Q60769 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.34■□□□□ 0.53
Tnfaip3Q60769 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfaip3Q60769 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfaip3Q60769 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfaip3Q60769 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Tnfaip3Q60769 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Tnfaip3Q60769 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfaip3Q60769 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfaip3Q60769 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Tnfaip3Q60769 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tnfaip3Q60769 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tnfaip3Q60769 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tnfaip3Q60769 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.33■□□□□ 0.52
Tnfaip3Q60769 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfaip3Q60769 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Tnfaip3Q60769 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfaip3Q60769 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfaip3Q60769 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfaip3Q60769 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Tnfaip3Q60769 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfaip3Q60769 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfaip3Q60769 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfaip3Q60769 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.33■□□□□ 0.52
Tnfaip3Q60769 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Tnfaip3Q60769 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.32■□□□□ 0.52
Tnfaip3Q60769 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.32■□□□□ 0.52
Tnfaip3Q60769 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.32■□□□□ 0.52
Tnfaip3Q60769 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfaip3Q60769 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Tnfaip3Q60769 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfaip3Q60769 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfaip3Q60769 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.31■□□□□ 0.52
Tnfaip3Q60769 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfaip3Q60769 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tnfaip3Q60769 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Tnfaip3Q60769 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tnfaip3Q60769 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfaip3Q60769 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfaip3Q60769 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfaip3Q60769 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tnfaip3Q60769 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Tnfaip3Q60769 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfaip3Q60769 Gm5874-201ENSMUST00000096101 508 ntBASIC18.31■□□□□ 0.52
Tnfaip3Q60769 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfaip3Q60769 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.31■□□□□ 0.52
Tnfaip3Q60769 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfaip3Q60769 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfaip3Q60769 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfaip3Q60769 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfaip3Q60769 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.3■□□□□ 0.52
Tnfaip3Q60769 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.3■□□□□ 0.52
Tnfaip3Q60769 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfaip3Q60769 Gm10493-201ENSMUST00000097270 612 ntBASIC18.3■□□□□ 0.52
Tnfaip3Q60769 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Tnfaip3Q60769 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Tnfaip3Q60769 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfaip3Q60769 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfaip3Q60769 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfaip3Q60769 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfaip3Q60769 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Tnfaip3Q60769 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms