Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Clhc1Q5M6W3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clhc1Q5M6W3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clhc1Q5M6W3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clhc1Q5M6W3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clhc1Q5M6W3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Clhc1Q5M6W3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clhc1Q5M6W3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clhc1Q5M6W3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clhc1Q5M6W3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clhc1Q5M6W3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
Clhc1Q5M6W3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clhc1Q5M6W3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clhc1Q5M6W3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clhc1Q5M6W3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clhc1Q5M6W3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Clhc1Q5M6W3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clhc1Q5M6W3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clhc1Q5M6W3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clhc1Q5M6W3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Clhc1Q5M6W3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clhc1Q5M6W3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Clhc1Q5M6W3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clhc1Q5M6W3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clhc1Q5M6W3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Clhc1Q5M6W3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Clhc1Q5M6W3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.77■□□□□ 0.6
Clhc1Q5M6W3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.77■□□□□ 0.6
Clhc1Q5M6W3 Gm40881-201ENSMUST00000223397 166 ntBASIC18.77■□□□□ 0.6
Clhc1Q5M6W3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clhc1Q5M6W3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Clhc1Q5M6W3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clhc1Q5M6W3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clhc1Q5M6W3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clhc1Q5M6W3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clhc1Q5M6W3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Clhc1Q5M6W3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clhc1Q5M6W3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Clhc1Q5M6W3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clhc1Q5M6W3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Clhc1Q5M6W3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clhc1Q5M6W3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Clhc1Q5M6W3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clhc1Q5M6W3 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.76■□□□□ 0.59
Clhc1Q5M6W3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.76■□□□□ 0.59
Clhc1Q5M6W3 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.76■□□□□ 0.59
Clhc1Q5M6W3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Clhc1Q5M6W3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.76■□□□□ 0.59
Clhc1Q5M6W3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clhc1Q5M6W3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clhc1Q5M6W3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Clhc1Q5M6W3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Clhc1Q5M6W3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.76■□□□□ 0.59
Clhc1Q5M6W3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clhc1Q5M6W3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Clhc1Q5M6W3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clhc1Q5M6W3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clhc1Q5M6W3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clhc1Q5M6W3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clhc1Q5M6W3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clhc1Q5M6W3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.75■□□□□ 0.59
Clhc1Q5M6W3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clhc1Q5M6W3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
Clhc1Q5M6W3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.75■□□□□ 0.59
Clhc1Q5M6W3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clhc1Q5M6W3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Clhc1Q5M6W3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clhc1Q5M6W3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clhc1Q5M6W3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Clhc1Q5M6W3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Clhc1Q5M6W3 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.75■□□□□ 0.59
Clhc1Q5M6W3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clhc1Q5M6W3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Clhc1Q5M6W3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clhc1Q5M6W3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clhc1Q5M6W3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Clhc1Q5M6W3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clhc1Q5M6W3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Clhc1Q5M6W3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clhc1Q5M6W3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Clhc1Q5M6W3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.74■□□□□ 0.59
Clhc1Q5M6W3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clhc1Q5M6W3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clhc1Q5M6W3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clhc1Q5M6W3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clhc1Q5M6W3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Clhc1Q5M6W3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clhc1Q5M6W3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Clhc1Q5M6W3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clhc1Q5M6W3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.73■□□□□ 0.59
Clhc1Q5M6W3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Clhc1Q5M6W3 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.73■□□□□ 0.59
Clhc1Q5M6W3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clhc1Q5M6W3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.73■□□□□ 0.59
Clhc1Q5M6W3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Clhc1Q5M6W3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clhc1Q5M6W3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clhc1Q5M6W3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.73■□□□□ 0.59
Clhc1Q5M6W3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clhc1Q5M6W3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms