Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Rnf20Q5DTM8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
Rnf20Q5DTM8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rnf20Q5DTM8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rnf20Q5DTM8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rnf20Q5DTM8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rnf20Q5DTM8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Rnf20Q5DTM8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rnf20Q5DTM8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rnf20Q5DTM8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Rnf20Q5DTM8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Rnf20Q5DTM8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC23.25■■□□□ 1.31
Rnf20Q5DTM8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Rnf20Q5DTM8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Rnf20Q5DTM8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Rnf20Q5DTM8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rnf20Q5DTM8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rnf20Q5DTM8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rnf20Q5DTM8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC23.24■■□□□ 1.31
Rnf20Q5DTM8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rnf20Q5DTM8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
Rnf20Q5DTM8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf20Q5DTM8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf20Q5DTM8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf20Q5DTM8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf20Q5DTM8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf20Q5DTM8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Rnf20Q5DTM8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC23.23■■□□□ 1.31
Rnf20Q5DTM8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC23.23■■□□□ 1.31
Rnf20Q5DTM8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Rnf20Q5DTM8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf20Q5DTM8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf20Q5DTM8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf20Q5DTM8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf20Q5DTM8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf20Q5DTM8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf20Q5DTM8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rnf20Q5DTM8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Rnf20Q5DTM8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rnf20Q5DTM8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
Rnf20Q5DTM8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rnf20Q5DTM8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rnf20Q5DTM8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rnf20Q5DTM8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf20Q5DTM8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Rnf20Q5DTM8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf20Q5DTM8 Gm7160-202ENSMUST00000188519 1027 ntBASIC23.21■■□□□ 1.31
Rnf20Q5DTM8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
Rnf20Q5DTM8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC23.21■■□□□ 1.31
Rnf20Q5DTM8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC23.21■■□□□ 1.31
Rnf20Q5DTM8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf20Q5DTM8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf20Q5DTM8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf20Q5DTM8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rnf20Q5DTM8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rnf20Q5DTM8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Rnf20Q5DTM8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rnf20Q5DTM8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Rnf20Q5DTM8 Spcs1-204ENSMUST00000226782 949 ntBASIC23.2■■□□□ 1.3
Rnf20Q5DTM8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Rnf20Q5DTM8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC23.2■■□□□ 1.3
Rnf20Q5DTM8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rnf20Q5DTM8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Rnf20Q5DTM8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC23.2■■□□□ 1.3
Rnf20Q5DTM8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rnf20Q5DTM8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rnf20Q5DTM8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC23.19■■□□□ 1.3
Rnf20Q5DTM8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rnf20Q5DTM8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rnf20Q5DTM8 Golph3-202ENSMUST00000226517 2359 ntBASIC23.19■■□□□ 1.3
Rnf20Q5DTM8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rnf20Q5DTM8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rnf20Q5DTM8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC23.19■■□□□ 1.3
Rnf20Q5DTM8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rnf20Q5DTM8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC23.19■■□□□ 1.3
Rnf20Q5DTM8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rnf20Q5DTM8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rnf20Q5DTM8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC23.19■■□□□ 1.3
Rnf20Q5DTM8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rnf20Q5DTM8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rnf20Q5DTM8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rnf20Q5DTM8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rnf20Q5DTM8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rnf20Q5DTM8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC23.18■■□□□ 1.3
Rnf20Q5DTM8 AC154266.1-201ENSMUST00000223190 503 ntBASIC23.18■■□□□ 1.3
Rnf20Q5DTM8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rnf20Q5DTM8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rnf20Q5DTM8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rnf20Q5DTM8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rnf20Q5DTM8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Rnf20Q5DTM8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rnf20Q5DTM8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Rnf20Q5DTM8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Rnf20Q5DTM8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Rnf20Q5DTM8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Rnf20Q5DTM8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rnf20Q5DTM8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rnf20Q5DTM8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
Rnf20Q5DTM8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf20Q5DTM8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms