Protein–RNA interactions for Protein: Q3V079

Bbof1, Basal body-orientation factor 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbof1Q3V079 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Bbof1Q3V079 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Bbof1Q3V079 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.31■■□□□ 1
Bbof1Q3V079 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Bbof1Q3V079 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Bbof1Q3V079 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Bbof1Q3V079 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Bbof1Q3V079 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Bbof1Q3V079 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Bbof1Q3V079 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC21.3■■□□□ 1
Bbof1Q3V079 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Bbof1Q3V079 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Bbof1Q3V079 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Bbof1Q3V079 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.3■■□□□ 1
Bbof1Q3V079 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
Bbof1Q3V079 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.3■■□□□ 1
Bbof1Q3V079 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.3■■□□□ 1
Bbof1Q3V079 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.3■■□□□ 1
Bbof1Q3V079 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.3■■□□□ 1
Bbof1Q3V079 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Bbof1Q3V079 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Bbof1Q3V079 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Bbof1Q3V079 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Bbof1Q3V079 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Bbof1Q3V079 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Bbof1Q3V079 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Bbof1Q3V079 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Bbof1Q3V079 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Bbof1Q3V079 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Bbof1Q3V079 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Bbof1Q3V079 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Bbof1Q3V079 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Bbof1Q3V079 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.29■■□□□ 1
Bbof1Q3V079 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.29■■□□□ 1
Bbof1Q3V079 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.29■■□□□ 1
Bbof1Q3V079 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.29■■□□□ 1
Bbof1Q3V079 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.29■■□□□ 1
Bbof1Q3V079 Gm45417-201ENSMUST00000209533 758 ntBASIC21.29■■□□□ 1
Bbof1Q3V079 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Bbof1Q3V079 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.29■■□□□ 1
Bbof1Q3V079 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Bbof1Q3V079 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Bbof1Q3V079 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.28■■□□□ 1
Bbof1Q3V079 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Bbof1Q3V079 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.28■■□□□ 1
Bbof1Q3V079 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Bbof1Q3V079 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Bbof1Q3V079 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.28■■□□□ 1
Bbof1Q3V079 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Bbof1Q3V079 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Bbof1Q3V079 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Bbof1Q3V079 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.28■■□□□ 1
Bbof1Q3V079 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.28■■□□□ 1
Bbof1Q3V079 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
Bbof1Q3V079 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Bbof1Q3V079 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Bbof1Q3V079 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.28■■□□□ 1
Bbof1Q3V079 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Bbof1Q3V079 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Bbof1Q3V079 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Bbof1Q3V079 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Bbof1Q3V079 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.27■■□□□ 1
Bbof1Q3V079 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Bbof1Q3V079 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.27■■□□□ 1
Bbof1Q3V079 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.27■■□□□ 1
Bbof1Q3V079 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Bbof1Q3V079 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Bbof1Q3V079 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Bbof1Q3V079 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Bbof1Q3V079 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC21.26■□□□□ 0.99
Bbof1Q3V079 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Bbof1Q3V079 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Bbof1Q3V079 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Bbof1Q3V079 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Bbof1Q3V079 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Bbof1Q3V079 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Bbof1Q3V079 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Bbof1Q3V079 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Bbof1Q3V079 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Bbof1Q3V079 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Bbof1Q3V079 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Bbof1Q3V079 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Bbof1Q3V079 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Bbof1Q3V079 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Bbof1Q3V079 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Bbof1Q3V079 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Bbof1Q3V079 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Bbof1Q3V079 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Bbof1Q3V079 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Bbof1Q3V079 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Bbof1Q3V079 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Bbof1Q3V079 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC21.24■□□□□ 0.99
Bbof1Q3V079 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Bbof1Q3V079 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Bbof1Q3V079 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Bbof1Q3V079 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Bbof1Q3V079 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Bbof1Q3V079 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Bbof1Q3V079 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Bbof1Q3V079 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms