Protein–RNA interactions for Protein: Q3UHC2

Lrrk1, Leucine-rich repeat serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 2,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk1Q3UHC2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lrrk1Q3UHC2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrrk1Q3UHC2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.22■□□□□ 0.51
Lrrk1Q3UHC2 Gm27405-201ENSMUST00000184201 112 ntBASIC18.22■□□□□ 0.51
Lrrk1Q3UHC2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Lrrk1Q3UHC2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Lrrk1Q3UHC2 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lrrk1Q3UHC2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrrk1Q3UHC2 Gm27011-201ENSMUST00000182352 972 ntBASIC18.21■□□□□ 0.51
Lrrk1Q3UHC2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrrk1Q3UHC2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrrk1Q3UHC2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Lrrk1Q3UHC2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Lrrk1Q3UHC2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lrrk1Q3UHC2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrrk1Q3UHC2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrrk1Q3UHC2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Lrrk1Q3UHC2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lrrk1Q3UHC2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrrk1Q3UHC2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.2■□□□□ 0.5
Lrrk1Q3UHC2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.2■□□□□ 0.5
Lrrk1Q3UHC2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrrk1Q3UHC2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lrrk1Q3UHC2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lrrk1Q3UHC2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.19■□□□□ 0.5
Lrrk1Q3UHC2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.19■□□□□ 0.5
Lrrk1Q3UHC2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.19■□□□□ 0.5
Lrrk1Q3UHC2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Lrrk1Q3UHC2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Lrrk1Q3UHC2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrrk1Q3UHC2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrrk1Q3UHC2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Lrrk1Q3UHC2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrrk1Q3UHC2 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.19■□□□□ 0.5
Lrrk1Q3UHC2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrk1Q3UHC2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrk1Q3UHC2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrk1Q3UHC2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrk1Q3UHC2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrk1Q3UHC2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrk1Q3UHC2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrk1Q3UHC2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrk1Q3UHC2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrk1Q3UHC2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.17■□□□□ 0.5
Lrrk1Q3UHC2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
Lrrk1Q3UHC2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrk1Q3UHC2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrk1Q3UHC2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrk1Q3UHC2 Gm43060-201ENSMUST00000200621 289 ntBASIC18.16■□□□□ 0.5
Lrrk1Q3UHC2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrk1Q3UHC2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrk1Q3UHC2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrk1Q3UHC2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrk1Q3UHC2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrk1Q3UHC2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Lrrk1Q3UHC2 Gm37179-201ENSMUST00000194862 823 ntBASIC18.16■□□□□ 0.5
Lrrk1Q3UHC2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrk1Q3UHC2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Lrrk1Q3UHC2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrk1Q3UHC2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrk1Q3UHC2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrk1Q3UHC2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrk1Q3UHC2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrk1Q3UHC2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrk1Q3UHC2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Lrrk1Q3UHC2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.15■□□□□ 0.5
Lrrk1Q3UHC2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrk1Q3UHC2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrk1Q3UHC2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrk1Q3UHC2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrk1Q3UHC2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrk1Q3UHC2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrk1Q3UHC2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrk1Q3UHC2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrk1Q3UHC2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrk1Q3UHC2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrk1Q3UHC2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
Lrrk1Q3UHC2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lrrk1Q3UHC2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lrrk1Q3UHC2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lrrk1Q3UHC2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lrrk1Q3UHC2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.14■□□□□ 0.49
Lrrk1Q3UHC2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Lrrk1Q3UHC2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Lrrk1Q3UHC2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
Lrrk1Q3UHC2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lrrk1Q3UHC2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lrrk1Q3UHC2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lrrk1Q3UHC2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrrk1Q3UHC2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lrrk1Q3UHC2 Gm42569-201ENSMUST00000200539 472 ntBASIC18.13■□□□□ 0.49
Lrrk1Q3UHC2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrrk1Q3UHC2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lrrk1Q3UHC2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrrk1Q3UHC2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrrk1Q3UHC2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Lrrk1Q3UHC2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lrrk1Q3UHC2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrrk1Q3UHC2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrrk1Q3UHC2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms