Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Q3U1D9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Q3U1D9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Q3U1D9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
Q3U1D9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Q3U1D9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.98■□□□□ 0.31
Q3U1D9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.98■□□□□ 0.31
Q3U1D9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.98■□□□□ 0.31
Q3U1D9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Q3U1D9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Q3U1D9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Q3U1D9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Q3U1D9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Q3U1D9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.97■□□□□ 0.31
Q3U1D9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Q3U1D9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Q3U1D9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.97■□□□□ 0.31
Q3U1D9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Q3U1D9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Q3U1D9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Q3U1D9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Q3U1D9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Q3U1D9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Q3U1D9 Gm13234-201ENSMUST00000120010 747 ntBASIC16.96■□□□□ 0.31
Q3U1D9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Q3U1D9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.96■□□□□ 0.31
Q3U1D9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Q3U1D9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Q3U1D9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Q3U1D9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Q3U1D9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Q3U1D9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Q3U1D9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Q3U1D9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Q3U1D9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.95■□□□□ 0.3
Q3U1D9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Q3U1D9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Q3U1D9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Q3U1D9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Q3U1D9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Q3U1D9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Q3U1D9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Q3U1D9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Q3U1D9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Q3U1D9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.95■□□□□ 0.3
Q3U1D9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Q3U1D9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Q3U1D9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.94■□□□□ 0.3
Q3U1D9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Q3U1D9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Q3U1D9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Q3U1D9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Q3U1D9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Q3U1D9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Q3U1D9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Q3U1D9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Q3U1D9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.94■□□□□ 0.3
Q3U1D9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Q3U1D9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Q3U1D9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Q3U1D9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Q3U1D9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Q3U1D9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Q3U1D9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Q3U1D9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Q3U1D9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
Q3U1D9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q3U1D9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q3U1D9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q3U1D9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q3U1D9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q3U1D9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q3U1D9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q3U1D9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q3U1D9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Q3U1D9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q3U1D9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q3U1D9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Q3U1D9 AA386476-201ENSMUST00000098781 1665 ntBASIC16.92■□□□□ 0.3
Q3U1D9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q3U1D9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q3U1D9 Gm37179-201ENSMUST00000194862 823 ntBASIC16.92■□□□□ 0.3
Q3U1D9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Q3U1D9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.92■□□□□ 0.3
Q3U1D9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.92■□□□□ 0.3
Q3U1D9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.92■□□□□ 0.3
Q3U1D9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q3U1D9 Reep4-203ENSMUST00000226563 1444 ntBASIC16.92■□□□□ 0.3
Q3U1D9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q3U1D9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Q3U1D9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q3U1D9 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.92■□□□□ 0.3
Q3U1D9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q3U1D9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Q3U1D9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q3U1D9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q3U1D9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Q3U1D9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.91■□□□□ 0.3
Q3U1D9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Q3U1D9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms