Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Khdc4Q3TCX3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
Khdc4Q3TCX3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Khdc4Q3TCX3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Khdc4Q3TCX3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Khdc4Q3TCX3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Khdc4Q3TCX3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.54■□□□□ 0.56
Khdc4Q3TCX3 Smad6-203ENSMUST00000179458 273 ntBASIC18.54■□□□□ 0.56
Khdc4Q3TCX3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.54■□□□□ 0.56
Khdc4Q3TCX3 Gm7291-201ENSMUST00000199147 382 ntBASIC18.54■□□□□ 0.56
Khdc4Q3TCX3 Gm42569-201ENSMUST00000200539 472 ntBASIC18.54■□□□□ 0.56
Khdc4Q3TCX3 Gm42642-201ENSMUST00000200683 355 ntBASIC18.54■□□□□ 0.56
Khdc4Q3TCX3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Khdc4Q3TCX3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Khdc4Q3TCX3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Khdc4Q3TCX3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Khdc4Q3TCX3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Khdc4Q3TCX3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Khdc4Q3TCX3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Khdc4Q3TCX3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.53■□□□□ 0.56
Khdc4Q3TCX3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Khdc4Q3TCX3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Khdc4Q3TCX3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Khdc4Q3TCX3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Khdc4Q3TCX3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Khdc4Q3TCX3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Khdc4Q3TCX3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Khdc4Q3TCX3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Khdc4Q3TCX3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.52■□□□□ 0.56
Khdc4Q3TCX3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Khdc4Q3TCX3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Khdc4Q3TCX3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Khdc4Q3TCX3 Gm26571-201ENSMUST00000181399 666 ntBASIC18.52■□□□□ 0.56
Khdc4Q3TCX3 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.52■□□□□ 0.56
Khdc4Q3TCX3 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.52■□□□□ 0.56
Khdc4Q3TCX3 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.52■□□□□ 0.56
Khdc4Q3TCX3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Khdc4Q3TCX3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Khdc4Q3TCX3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.51■□□□□ 0.55
Khdc4Q3TCX3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Khdc4Q3TCX3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Khdc4Q3TCX3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Khdc4Q3TCX3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Khdc4Q3TCX3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Khdc4Q3TCX3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.51■□□□□ 0.55
Khdc4Q3TCX3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Khdc4Q3TCX3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.51■□□□□ 0.55
Khdc4Q3TCX3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.51■□□□□ 0.55
Khdc4Q3TCX3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Khdc4Q3TCX3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Khdc4Q3TCX3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Khdc4Q3TCX3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Khdc4Q3TCX3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Khdc4Q3TCX3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Khdc4Q3TCX3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Khdc4Q3TCX3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Khdc4Q3TCX3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Khdc4Q3TCX3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Khdc4Q3TCX3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.5■□□□□ 0.55
Khdc4Q3TCX3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Khdc4Q3TCX3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Khdc4Q3TCX3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Khdc4Q3TCX3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Khdc4Q3TCX3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.5■□□□□ 0.55
Khdc4Q3TCX3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Khdc4Q3TCX3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Khdc4Q3TCX3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Khdc4Q3TCX3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.49■□□□□ 0.55
Khdc4Q3TCX3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Khdc4Q3TCX3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Khdc4Q3TCX3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Khdc4Q3TCX3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.49■□□□□ 0.55
Khdc4Q3TCX3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.49■□□□□ 0.55
Khdc4Q3TCX3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Khdc4Q3TCX3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Khdc4Q3TCX3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Khdc4Q3TCX3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Khdc4Q3TCX3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Khdc4Q3TCX3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Khdc4Q3TCX3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Khdc4Q3TCX3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.49■□□□□ 0.55
Khdc4Q3TCX3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Khdc4Q3TCX3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Khdc4Q3TCX3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.48■□□□□ 0.55
Khdc4Q3TCX3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Khdc4Q3TCX3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.48■□□□□ 0.55
Khdc4Q3TCX3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.48■□□□□ 0.55
Khdc4Q3TCX3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Khdc4Q3TCX3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Khdc4Q3TCX3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Khdc4Q3TCX3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Khdc4Q3TCX3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Khdc4Q3TCX3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.48■□□□□ 0.55
Khdc4Q3TCX3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Khdc4Q3TCX3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Khdc4Q3TCX3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Khdc4Q3TCX3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Khdc4Q3TCX3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Khdc4Q3TCX3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Khdc4Q3TCX3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 138.9 ms