Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Q3KNL4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Q3KNL4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Q3KNL4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Q3KNL4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Q3KNL4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Q3KNL4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Q3KNL4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Q3KNL4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Q3KNL4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Q3KNL4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Q3KNL4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Q3KNL4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Q3KNL4 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Q3KNL4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Q3KNL4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Q3KNL4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Q3KNL4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Q3KNL4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Q3KNL4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Q3KNL4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Q3KNL4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Q3KNL4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Q3KNL4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Q3KNL4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.18■□□□□ 0.66
Q3KNL4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Q3KNL4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Q3KNL4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
Q3KNL4 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Q3KNL4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Q3KNL4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Q3KNL4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.17■□□□□ 0.66
Q3KNL4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Q3KNL4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Q3KNL4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Q3KNL4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Q3KNL4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Q3KNL4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Q3KNL4 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Q3KNL4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Q3KNL4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.17■□□□□ 0.66
Q3KNL4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.16■□□□□ 0.66
Q3KNL4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Q3KNL4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Q3KNL4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.16■□□□□ 0.66
Q3KNL4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Q3KNL4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Q3KNL4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Q3KNL4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.16■□□□□ 0.66
Q3KNL4 Gm9959-201ENSMUST00000068277 390 ntBASIC19.16■□□□□ 0.66
Q3KNL4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Q3KNL4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Q3KNL4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Q3KNL4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Q3KNL4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q3KNL4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q3KNL4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Q3KNL4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Q3KNL4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q3KNL4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q3KNL4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Q3KNL4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.15■□□□□ 0.66
Q3KNL4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Q3KNL4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q3KNL4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q3KNL4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.15■□□□□ 0.66
Q3KNL4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q3KNL4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q3KNL4 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Q3KNL4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.14■□□□□ 0.66
Q3KNL4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.66
Q3KNL4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Q3KNL4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Q3KNL4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Q3KNL4 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.14■□□□□ 0.65
Q3KNL4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Q3KNL4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Q3KNL4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Q3KNL4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Q3KNL4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Q3KNL4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Q3KNL4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Q3KNL4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Q3KNL4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Q3KNL4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.13■□□□□ 0.65
Q3KNL4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.13■□□□□ 0.65
Q3KNL4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.13■□□□□ 0.65
Q3KNL4 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.13■□□□□ 0.65
Q3KNL4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Q3KNL4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.13■□□□□ 0.65
Q3KNL4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Q3KNL4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Q3KNL4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Q3KNL4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Q3KNL4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Q3KNL4 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Q3KNL4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Q3KNL4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Q3KNL4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Q3KNL4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms