Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim43cP86449 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Trim43cP86449 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Trim43cP86449 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim43cP86449 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.36■■□□□ 1.01
Trim43cP86449 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim43cP86449 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim43cP86449 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim43cP86449 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim43cP86449 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim43cP86449 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trim43cP86449 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trim43cP86449 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.36■■□□□ 1.01
Trim43cP86449 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Trim43cP86449 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.35■■□□□ 1.01
Trim43cP86449 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.35■■□□□ 1.01
Trim43cP86449 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.35■■□□□ 1.01
Trim43cP86449 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.35■■□□□ 1.01
Trim43cP86449 Gm45417-201ENSMUST00000209533 758 ntBASIC21.35■■□□□ 1.01
Trim43cP86449 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.35■■□□□ 1.01
Trim43cP86449 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim43cP86449 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim43cP86449 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim43cP86449 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim43cP86449 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim43cP86449 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim43cP86449 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.34■■□□□ 1.01
Trim43cP86449 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim43cP86449 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Trim43cP86449 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim43cP86449 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.33■■□□□ 1.01
Trim43cP86449 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim43cP86449 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.33■■□□□ 1.01
Trim43cP86449 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim43cP86449 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trim43cP86449 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Trim43cP86449 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Trim43cP86449 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Trim43cP86449 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.33■■□□□ 1
Trim43cP86449 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Trim43cP86449 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim43cP86449 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim43cP86449 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim43cP86449 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim43cP86449 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.32■■□□□ 1
Trim43cP86449 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim43cP86449 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim43cP86449 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim43cP86449 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Trim43cP86449 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim43cP86449 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim43cP86449 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim43cP86449 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim43cP86449 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim43cP86449 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim43cP86449 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Trim43cP86449 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trim43cP86449 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim43cP86449 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim43cP86449 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim43cP86449 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Trim43cP86449 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Trim43cP86449 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim43cP86449 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Trim43cP86449 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim43cP86449 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.29■■□□□ 1
Trim43cP86449 Smad6-203ENSMUST00000179458 273 ntBASIC21.29■■□□□ 1
Trim43cP86449 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.29■■□□□ 1
Trim43cP86449 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim43cP86449 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim43cP86449 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim43cP86449 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim43cP86449 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim43cP86449 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim43cP86449 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Trim43cP86449 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim43cP86449 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trim43cP86449 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.27■■□□□ 1
Trim43cP86449 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.27■■□□□ 1
Trim43cP86449 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trim43cP86449 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim43cP86449 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Trim43cP86449 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trim43cP86449 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trim43cP86449 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.26■□□□□ 0.99
Trim43cP86449 Gm8493-201ENSMUST00000196881 489 ntBASIC21.26■□□□□ 0.99
Trim43cP86449 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim43cP86449 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim43cP86449 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim43cP86449 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Trim43cP86449 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim43cP86449 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim43cP86449 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim43cP86449 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Trim43cP86449 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Trim43cP86449 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim43cP86449 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim43cP86449 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim43cP86449 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim43cP86449 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms