Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.44■□□□□ 0.38
SgcbP82349 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.44■□□□□ 0.38
SgcbP82349 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SgcbP82349 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SgcbP82349 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SgcbP82349 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SgcbP82349 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SgcbP82349 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SgcbP82349 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SgcbP82349 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SgcbP82349 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SgcbP82349 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SgcbP82349 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SgcbP82349 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.43■□□□□ 0.38
SgcbP82349 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SgcbP82349 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SgcbP82349 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SgcbP82349 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SgcbP82349 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.42■□□□□ 0.38
SgcbP82349 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SgcbP82349 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SgcbP82349 Smad6-203ENSMUST00000179458 273 ntBASIC17.42■□□□□ 0.38
SgcbP82349 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SgcbP82349 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SgcbP82349 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SgcbP82349 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SgcbP82349 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SgcbP82349 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.41■□□□□ 0.38
SgcbP82349 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SgcbP82349 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SgcbP82349 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SgcbP82349 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SgcbP82349 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SgcbP82349 Gm11421-201ENSMUST00000122124 294 ntBASIC17.41■□□□□ 0.38
SgcbP82349 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SgcbP82349 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SgcbP82349 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SgcbP82349 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.41■□□□□ 0.38
SgcbP82349 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SgcbP82349 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SgcbP82349 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SgcbP82349 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SgcbP82349 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SgcbP82349 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.41■□□□□ 0.38
SgcbP82349 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SgcbP82349 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.4■□□□□ 0.38
SgcbP82349 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SgcbP82349 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.4■□□□□ 0.38
SgcbP82349 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.4■□□□□ 0.38
SgcbP82349 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SgcbP82349 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SgcbP82349 Gm40848-201ENSMUST00000221998 324 ntBASIC17.4■□□□□ 0.38
SgcbP82349 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SgcbP82349 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SgcbP82349 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SgcbP82349 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SgcbP82349 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SgcbP82349 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SgcbP82349 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SgcbP82349 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.39■□□□□ 0.38
SgcbP82349 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
SgcbP82349 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SgcbP82349 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SgcbP82349 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SgcbP82349 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SgcbP82349 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SgcbP82349 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SgcbP82349 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SgcbP82349 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SgcbP82349 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.39■□□□□ 0.37
SgcbP82349 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SgcbP82349 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.39■□□□□ 0.37
SgcbP82349 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SgcbP82349 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SgcbP82349 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SgcbP82349 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgcbP82349 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SgcbP82349 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgcbP82349 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgcbP82349 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SgcbP82349 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SgcbP82349 Gm43060-201ENSMUST00000200621 289 ntBASIC17.38■□□□□ 0.37
SgcbP82349 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
SgcbP82349 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.38■□□□□ 0.37
SgcbP82349 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgcbP82349 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgcbP82349 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgcbP82349 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgcbP82349 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.38■□□□□ 0.37
SgcbP82349 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgcbP82349 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SgcbP82349 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SgcbP82349 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.37■□□□□ 0.37
SgcbP82349 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SgcbP82349 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SgcbP82349 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SgcbP82349 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SgcbP82349 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SgcbP82349 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SgcbP82349 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms