Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cxcr4P70658 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.3■□□□□ 0.52
Cxcr4P70658 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cxcr4P70658 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cxcr4P70658 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cxcr4P70658 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.3■□□□□ 0.52
Cxcr4P70658 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cxcr4P70658 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.3■□□□□ 0.52
Cxcr4P70658 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cxcr4P70658 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cxcr4P70658 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cxcr4P70658 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cxcr4P70658 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cxcr4P70658 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cxcr4P70658 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cxcr4P70658 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cxcr4P70658 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Cxcr4P70658 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cxcr4P70658 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cxcr4P70658 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cxcr4P70658 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cxcr4P70658 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cxcr4P70658 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.28■□□□□ 0.52
Cxcr4P70658 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Cxcr4P70658 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cxcr4P70658 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cxcr4P70658 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cxcr4P70658 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cxcr4P70658 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cxcr4P70658 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cxcr4P70658 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Cxcr4P70658 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cxcr4P70658 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cxcr4P70658 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cxcr4P70658 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cxcr4P70658 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cxcr4P70658 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cxcr4P70658 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cxcr4P70658 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cxcr4P70658 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cxcr4P70658 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cxcr4P70658 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cxcr4P70658 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cxcr4P70658 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cxcr4P70658 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Cxcr4P70658 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
Cxcr4P70658 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cxcr4P70658 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cxcr4P70658 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cxcr4P70658 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cxcr4P70658 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cxcr4P70658 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.26■□□□□ 0.51
Cxcr4P70658 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cxcr4P70658 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Cxcr4P70658 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cxcr4P70658 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cxcr4P70658 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cxcr4P70658 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cxcr4P70658 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcr4P70658 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.25■□□□□ 0.51
Cxcr4P70658 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcr4P70658 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcr4P70658 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcr4P70658 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.25■□□□□ 0.51
Cxcr4P70658 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcr4P70658 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cxcr4P70658 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcr4P70658 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcr4P70658 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcr4P70658 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.24■□□□□ 0.51
Cxcr4P70658 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cxcr4P70658 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cxcr4P70658 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cxcr4P70658 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cxcr4P70658 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cxcr4P70658 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcr4P70658 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcr4P70658 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcr4P70658 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cxcr4P70658 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcr4P70658 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.23■□□□□ 0.51
Cxcr4P70658 Gm27454-201ENSMUST00000185090 204 ntBASIC18.23■□□□□ 0.51
Cxcr4P70658 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcr4P70658 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.23■□□□□ 0.51
Cxcr4P70658 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcr4P70658 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcr4P70658 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcr4P70658 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcr4P70658 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcr4P70658 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcr4P70658 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcr4P70658 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcr4P70658 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cxcr4P70658 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cxcr4P70658 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cxcr4P70658 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cxcr4P70658 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cxcr4P70658 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Cxcr4P70658 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cxcr4P70658 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms